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IMGVR_UViG_3300009688_000661-3300009688-Ga0116176_1000116239
Arc-VirIMGVR_UViG_3300009688_000661-3300009688-Ga0116176_1000116239
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-36_131-223
Domain cluster:
rep: MT457475.1__QKE60850.1__X__00045__D81-170
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.70 | 41.0 | 5.14e-01 | 75.4% | 100.0% |
| 3bbaA00 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.67 | 61.0 | 4.73e-01 | 99.1% | 98.8% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 56.0 | 5.16e-01 | 97.4% | 98.6% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 31.0 | 3.95e-01 | 78.1% | 96.6% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.57 | 49.0 | 4.76e-01 | 94.7% | 96.9% |
| 3hl8A02 | 3.30.1520.20 | Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 | 0.55 | 40.0 | 3.80e-01 | 75.4% | 70.1% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 37.0 | 3.52e-01 | 71.1% | 88.1% |
| 4wd3A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 32.0 | 3.71e-01 | 78.1% | 88.0% |
| 4ffkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.53 | 29.0 | 2.88e-01 | 82.5% | 49.6% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.53 | 41.0 | 4.31e-01 | 81.6% | 96.0% |
| 4ii1A01 | 2.30.30.1190 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 35.0 | 4.03e-01 | 90.4% | 98.8% |
| 3m4rA01 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.51 | 38.0 | 3.17e-01 | 78.9% | 95.5% |
| 3ty4B00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.50 | 38.0 | 2.76e-01 | 80.7% | 58.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5061293 | 219.1.1.77 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 | 0.75 | 68.0 | 5.37e-01 | 95.6% | 96.3% |
| 3479869 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 68.0 | 4.81e-01 | 100.0% | 79.0% |
| 3519107 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.73 | 68.0 | 4.73e-01 | 100.0% | 79.0% |
| 5034437 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 67.0 | 5.03e-01 | 98.2% | 99.6% |
| 3250297 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.72 | 67.0 | 4.96e-01 | 100.0% | 83.9% |
| 3260732 | 219.1.1.78 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 | 0.72 | 66.0 | 5.29e-01 | 97.4% | 100.0% |
| 4139778 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.72 | 43.0 | 5.14e-01 | 78.1% | 91.8% |
| 4937587 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 63.0 | 5.52e-01 | 94.7% | 98.8% |
| 5012604 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.71 | 67.0 | 5.35e-01 | 100.0% | 99.0% |
| 5035935 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.71 | 63.0 | 5.29e-01 | 94.7% | 98.9% |
| 4870495 | 304.169.1.1 ↗ | a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WYL | 0.70 | 45.0 | 4.64e-01 | 78.1% | 67.6% |
| 3972041 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.70 | 66.0 | 5.79e-01 | 100.0% | 96.9% |
| 3588655 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 64.0 | 5.32e-01 | 96.5% | 98.9% |
| 4994895 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.67 | 46.0 | 5.34e-01 | 78.1% | 100.0% |
| 3591183 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 4.54e-01 | 77.2% | 99.0% |
| 3687614 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 42.0 | 4.73e-01 | 95.6% | 100.0% |
| 3628131 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 40.0 | 4.30e-01 | 79.8% | 88.0% |
| 3785886 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.54 | 38.0 | 3.12e-01 | 71.9% | 81.0% |
| 3801207 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.52 | 43.0 | 2.94e-01 | 91.2% | 71.2% |
| 3470022 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 35.0 | 3.31e-01 | 70.2% | 88.1% |
D2
medium
residues 37-130
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i8oA03 | 1.10.8.1130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain | 0.67 | 46.0 | 5.22e-01 | 91.5% | 100.0% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.65 | 45.0 | 5.01e-01 | 97.9% | 94.4% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 40.0 | 4.37e-01 | 100.0% | 89.9% |
| 6e1kA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 39.0 | 3.76e-01 | 100.0% | 63.4% |
| 1baa001 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.53 | 46.0 | 3.76e-01 | 100.0% | 89.2% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.51 | 41.0 | 2.95e-01 | 90.4% | 64.4% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.51 | 37.0 | 3.86e-01 | 97.9% | 83.1% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 30.0 | 2.96e-01 | 71.3% | 50.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3656055 | 219.1.1.48 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 | 0.65 | 57.0 | 4.10e-01 | 97.9% | 70.0% |
| 3395248 | 108.2.1.1 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP | 0.56 | 38.0 | 3.65e-01 | 94.7% | 57.4% |
| 3782183 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 49.0 | 3.19e-01 | 100.0% | 31.8% |
| 2738686 | 148.1.3.24 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_7 | 0.56 | 45.0 | 4.24e-01 | 100.0% | 70.9% |
| 1102248 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 35.0 | 3.67e-01 | 96.8% | 69.4% |
| 3248839 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.55 | 49.0 | 4.54e-01 | 100.0% | 92.5% |
| 3226906 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.54 | 30.0 | 3.20e-01 | 73.4% | 58.8% |
| 3691496 | 6088.1.1.0 ↗ | alpha arrays › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A | 0.54 | 40.0 | 3.96e-01 | 98.9% | 75.0% |
| 3964875 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.54 | 48.0 | 4.25e-01 | 100.0% | 78.5% |
| 3570202 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.53 | 36.0 | 3.57e-01 | 96.8% | 66.0% |
| 3960801 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.52 | 37.0 | 3.54e-01 | 75.5% | 68.7% |
| 4236667 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.51 | 44.0 | 3.23e-01 | 94.7% | 58.4% |