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IMGVR_UViG_3300009688_000714-3300009688-Ga0116176_100093244

Arc-Vir

IMGVR_UViG_3300009688_000714-3300009688-Ga0116176_100093244

Identity

Kingdom:
archaea

Quality

64.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-108
PDB
D2 high residues 139-232
PDB
Domain cluster: rep: IMGVR_UViG_3300010351_001513-3300010351-Ga0116248_100112358__D27-116
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 41.0 4.68e-01 100.0% 79.7%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 36.0 4.54e-01 86.2% 94.6%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 3.81e-01 73.4% 95.7%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 36.0 4.06e-01 79.8% 91.2%
5ixgA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.54 41.0 3.42e-01 80.9% 97.6%
4h7wA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.52 36.0 2.92e-01 70.2% 96.8%
1of5B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 43.0 3.92e-01 92.6% 83.6%
3ejvA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 44.0 3.69e-01 92.6% 84.3%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 43.0 3.49e-01 92.6% 79.1%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.74 43.0 4.67e-01 100.0% 68.8%
4968862 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 34.0 4.62e-01 89.4% 95.6%
4988502 375.1.1.298 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_HMPTM 0.69 28.0 3.92e-01 87.2% 77.8%
3746411 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.66 36.0 3.94e-01 73.4% 65.3%
4990492 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 35.0 4.57e-01 86.2% 100.0%
3297966 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.62 54.0 5.00e-01 100.0% 75.0%
5070387 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 39.0 4.30e-01 92.6% 81.3%
3342228 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.61 55.0 4.51e-01 100.0% 79.4%
3423907 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.61 55.0 4.56e-01 100.0% 79.4%
3383638 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.61 55.0 4.69e-01 100.0% 76.0%
3464303 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.60 55.0 4.63e-01 100.0% 81.9%
3833618 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.60 54.0 4.69e-01 100.0% 80.7%
3447797 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.58 53.0 4.52e-01 100.0% 76.7%
3465486 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.58 52.0 4.26e-01 100.0% 80.0%
4934871 2.1.1.368 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Arcadin_1 0.57 39.0 3.77e-01 71.3% 99.1%
3550168 4.8.1.27 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › CUL7_CUL9_N 0.57 44.0 4.48e-01 100.0% 84.4%
3271559 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 39.0 3.43e-01 71.3% 81.5%
4991994 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 32.0 3.84e-01 90.4% 94.5%
4517543 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.55 42.0 3.84e-01 100.0% 61.6%
2045052 9.5.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI 0.54 42.0 3.43e-01 80.9% 97.0%
4200278 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 37.0 3.97e-01 78.7% 82.5%
None — 0.53 45.0 4.17e-01 92.6% 85.8%
3970846 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 42.0 4.48e-01 85.1% 97.5%
3621948 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.53 37.0 3.20e-01 74.5% 75.5%
3516379 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 44.0 4.22e-01 95.7% 79.1%
3241172 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.51 42.0 4.01e-01 92.6% 83.5%
3996060 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.50 38.0 3.41e-01 81.9% 94.3%