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IMGVR_UViG_3300009689_000618-3300009689-Ga0116186_101210719
Arc-VirIMGVR_UViG_3300009689_000618-3300009689-Ga0116186_101210719
Identity
- Kingdom:
- archaea
Quality
79.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 40.0 | 4.61e-01 | 78.3% | 83.7% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 43.0 | 3.97e-01 | 78.3% | 51.7% |
| 3gmvX00 | 3.10.450.730 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › BLIP domain | 0.64 | 46.0 | 3.60e-01 | 76.8% | 66.7% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 39.0 | 4.00e-01 | 75.4% | 62.7% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 51.0 | 3.37e-01 | 95.7% | 56.2% |
| 1q57G01 | 2.20.25.180 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.62 | 45.0 | 4.50e-01 | 78.3% | 79.5% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 43.0 | 3.76e-01 | 72.5% | 77.9% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 49.0 | 3.19e-01 | 94.2% | 58.0% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 48.0 | 3.70e-01 | 87.0% | 56.7% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.61 | 42.0 | 3.92e-01 | 72.5% | 63.2% |
| 3nixB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 45.0 | 2.81e-01 | 81.2% | 64.2% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 46.0 | 3.64e-01 | 87.0% | 54.4% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 45.0 | 3.43e-01 | 82.6% | 47.0% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 43.0 | 3.68e-01 | 78.3% | 57.8% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 47.0 | 3.16e-01 | 95.7% | 56.7% |
| 1reoA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 44.0 | 3.45e-01 | 82.6% | 60.1% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.57 | 45.0 | 3.58e-01 | 85.5% | 98.6% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 39.0 | 4.08e-01 | 76.8% | 82.0% |
| 3kstA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 48.0 | 3.27e-01 | 100.0% | 51.9% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 38.0 | 3.21e-01 | 75.4% | 41.2% |
| 2eigA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 48.0 | 3.34e-01 | 95.7% | 96.1% |
| 1dgmA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 44.0 | 2.94e-01 | 87.0% | 46.0% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 40.0 | 4.02e-01 | 79.7% | 74.6% |
| 4e5xG00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 38.0 | 3.40e-01 | 72.5% | 80.8% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 43.0 | 3.56e-01 | 85.5% | 96.8% |
| 8f5pC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.97e-01 | 92.8% | 57.0% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 40.0 | 3.72e-01 | 78.3% | 67.4% |
| 1szzA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.54 | 45.0 | 3.44e-01 | 94.2% | 82.5% |
| 3t8qB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 37.0 | 3.19e-01 | 75.4% | 43.5% |
| 3ammA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 42.0 | 2.83e-01 | 84.1% | 25.5% |
| 2wtzA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.54 | 41.0 | 2.84e-01 | 82.6% | 26.9% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.53 | 41.0 | 2.90e-01 | 82.6% | 30.4% |
| 1t0hA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 36.0 | 3.27e-01 | 71.0% | 68.8% |
| 1lm4A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.53 | 41.0 | 3.15e-01 | 91.3% | 77.9% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.07e-01 | 94.2% | 95.2% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.52 | 39.0 | 3.53e-01 | 85.5% | 92.3% |
| 6zxfz01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 40.0 | 3.36e-01 | 87.0% | 84.6% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 39.0 | 3.28e-01 | 84.1% | 98.3% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 36.0 | 3.82e-01 | 87.0% | 89.7% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3282315 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.70 | 48.0 | 3.62e-01 | 71.0% | 42.9% |
| 3733036 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.64 | 49.0 | 3.07e-01 | 82.6% | 64.8% |
| 4632722 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.63 | 48.0 | 3.28e-01 | 82.6% | 66.3% |
| 3725889 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.62 | 42.0 | 3.47e-01 | 71.0% | 92.3% |
| 4938162 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 48.0 | 4.48e-01 | 87.0% | 80.0% |
| 3866695 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.62 | 47.0 | 3.65e-01 | 82.6% | 94.8% |
| 3890928 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.62 | 47.0 | 3.49e-01 | 82.6% | 89.4% |
| 4994698 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.62 | 46.0 | 3.36e-01 | 81.2% | 96.4% |
| 4417109 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.61 | 40.0 | 3.48e-01 | 79.7% | 43.8% |
| 3673266 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 42.0 | 3.92e-01 | 76.8% | 58.8% |
| 5070259 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.60 | 47.0 | 3.47e-01 | 82.6% | 98.8% |
| 4973001 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.60 | 46.0 | 3.33e-01 | 81.2% | 97.4% |
| 4049072 | 2.4.1.6 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal | 0.60 | 40.0 | 3.48e-01 | 81.2% | 43.6% |
| 4142639 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.60 | 46.0 | 3.14e-01 | 84.1% | 65.1% |
| 4667660 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 37.0 | 2.44e-01 | 82.6% | 14.2% |
| 2093820 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.59 | 50.0 | 3.11e-01 | 100.0% | 49.1% |
| 4031599 | 101.1.2.584 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA | 0.58 | 39.0 | 3.58e-01 | 76.8% | 51.6% |
| 3707477 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 46.0 | 2.97e-01 | 94.2% | 52.7% |
| 4878518 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.57 | 43.0 | 3.40e-01 | 82.6% | 75.5% |
| 3289078 | 243.3.1.55 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PF27063 | 0.57 | 41.0 | 4.06e-01 | 79.7% | 98.7% |
| 3790784 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 36.0 | 2.42e-01 | 71.0% | 16.6% |
| 3975862 | 220.1.1.104 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin | 0.56 | 42.0 | 4.08e-01 | 82.6% | 75.0% |
| 4210722 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.56 | 40.0 | 3.59e-01 | 76.8% | 87.0% |
| 3822567 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.56 | 44.0 | 2.99e-01 | 92.8% | 60.1% |
| 3871111 | 206.1.1.262 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Mad3_BUB1_I | 0.55 | 41.0 | 2.46e-01 | 82.6% | 59.1% |
| 3483806 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.55 | 38.0 | 3.09e-01 | 73.9% | 98.0% |
| 3438797 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 38.0 | 2.44e-01 | 75.4% | 49.0% |
| 3877934 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.54 | 38.0 | 2.51e-01 | 75.4% | 70.9% |
| 3234820 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 41.0 | 2.66e-01 | 84.1% | 88.3% |
| 3599635 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 46.0 | 2.81e-01 | 100.0% | 28.7% |
| 3883849 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.54 | 39.0 | 2.63e-01 | 78.3% | 31.7% |
| 3403321 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 40.0 | 2.54e-01 | 81.2% | 45.4% |
| 3725498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 41.0 | 4.10e-01 | 85.5% | 88.6% |
| 3926120 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.53 | 38.0 | 3.08e-01 | 78.3% | 91.7% |
| 3547397 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.53 | 38.0 | 2.50e-01 | 78.3% | 33.4% |
| 3591224 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 3.98e-01 | 84.1% | 98.0% |
| 3703749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 36.0 | 3.71e-01 | 82.6% | 78.5% |
| 4139173 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 37.0 | 3.31e-01 | 76.8% | 69.0% |
| 4933430 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.51 | 43.0 | 3.32e-01 | 100.0% | 83.4% |
| 3393297 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 33.0 | 3.18e-01 | 87.0% | 56.2% |
| 3927695 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 39.0 | 2.69e-01 | 92.8% | 99.0% |
| 3389311 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 33.0 | 2.97e-01 | 72.5% | 46.0% |
| 3931872 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 39.0 | 2.57e-01 | 87.0% | 33.2% |
| 3933549 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 42.0 | 2.67e-01 | 92.8% | 92.5% |