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IMGVR_UViG_3300009690_001437-3300009690-Ga0116143_100113735

Arc-Vir

IMGVR_UViG_3300009690_001437-3300009690-Ga0116143_100113735

Quality

80.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-178
PDB
D2 high residues 199-288
PDB
D3 high residues 341-358_370-424
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hlvA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 47.0 4.99e-01 100.0% 91.7%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.63 50.0 4.40e-01 97.3% 58.5%
2rpaA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 50.0 4.93e-01 94.5% 81.8%
3tixA02 6.10.140.1690 Special › Helix non-globular › Helix Hairpins › 0.62 53.0 5.21e-01 97.3% 91.1%
6xz3A01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.62 52.0 4.46e-01 93.2% 91.5%
1a7eA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.61 54.0 4.61e-01 98.6% 83.1%
4iggB02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.61 52.0 4.37e-01 93.2% 81.8%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.60 48.0 4.41e-01 95.9% 66.0%
4ie5A02 1.20.58.1470 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FTO C-terminal domain 0.60 49.0 4.01e-01 89.0% 79.1%
1st6A01 1.20.120.810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle 0.59 51.0 3.50e-01 95.9% 42.4%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 48.0 4.84e-01 94.5% 87.8%
3kkbA00 1.20.120.880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain 0.59 50.0 4.20e-01 95.9% 54.8%
1zvzA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.59 50.0 4.25e-01 95.9% 83.9%
3ipiA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.59 50.0 3.43e-01 95.9% 35.8%
1k3kA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.58 43.0 3.44e-01 97.3% 39.7%
3m6jA01 1.20.1260.40 Mainly Alpha › Up-down Bundle › Ferritin › 0.57 48.0 4.07e-01 90.4% 87.2%
2zttA00 6.10.140.720 Special › Helix non-globular › Helix Hairpins › 0.57 44.0 4.43e-01 91.8% 83.6%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.57 44.0 4.41e-01 94.5% 82.7%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.56 46.0 3.87e-01 94.5% 65.2%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.55 43.0 3.32e-01 82.2% 55.8%
1wfdA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.55 43.0 4.06e-01 94.5% 67.7%
1aj3A00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 45.0 4.16e-01 94.5% 83.7%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.54 41.0 4.14e-01 94.5% 82.7%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 46.0 4.04e-01 97.3% 75.5%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.53 40.0 3.70e-01 94.5% 61.6%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.52 41.0 4.06e-01 97.3% 82.3%
2wzkA01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.52 43.0 3.69e-01 98.6% 55.1%
1hu3A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 43.0 3.14e-01 93.2% 43.6%
3umgA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 39.0 3.95e-01 100.0% 87.3%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026624 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.69 53.0 4.62e-01 82.2% 61.8%
5005703 3883.1.1.1 alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.64 52.0 3.94e-01 91.8% 42.1%
3404501 706.1.1.2 beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › MIEAP 0.64 54.0 4.03e-01 95.9% 48.2%
5003255 109.4.1.194 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.63 49.0 3.28e-01 95.9% 22.2%
3809724 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.63 55.0 4.36e-01 94.5% 62.9%
3615070 1075.4.1.9 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_tran+ABC_membrane 0.62 54.0 2.99e-01 98.6% 28.7%
3382549 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.62 51.0 4.57e-01 91.8% 82.9%
3358885 604.12.1.8 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT 0.62 49.0 4.77e-01 93.2% 77.5%
3669330 604.1.1.148 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N 0.62 54.0 5.11e-01 94.5% 82.4%
3500097 310.2.1.32 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Oxidored-like 0.62 51.0 4.81e-01 100.0% 76.7%
3884438 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.62 49.0 4.80e-01 94.5% 78.8%
5059237 3457.1.1.3 alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II 0.62 53.0 3.33e-01 93.2% 42.2%
4975050 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.61 49.0 4.88e-01 89.0% 86.7%
4976933 3930.1.1.0 alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase 0.61 47.0 3.95e-01 86.3% 51.9%
3225484 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.61 48.0 4.95e-01 94.5% 90.0%
4019732 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.61 54.0 4.39e-01 95.9% 65.4%
3490044 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.61 53.0 4.36e-01 95.9% 65.4%
3743554 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.61 53.0 4.26e-01 95.9% 58.6%
1503807 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.60 52.0 4.46e-01 95.9% 73.0%
3270441 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.60 48.0 4.80e-01 94.5% 84.0%
3879426 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.60 48.0 4.62e-01 94.5% 75.9%
3514842 603.1.1.3 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.60 53.0 4.66e-01 95.9% 75.2%
3594436 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.60 49.0 4.21e-01 91.8% 82.5%
4939273 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.60 44.0 4.50e-01 93.2% 82.9%
3883622 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.59 47.0 4.71e-01 94.5% 84.0%
3377792 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 45.0 4.46e-01 100.0% 77.5%
3186889 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.59 47.0 4.31e-01 94.5% 66.3%
3257188 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.59 52.0 4.27e-01 97.3% 62.3%
3626462 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 49.0 4.23e-01 91.8% 84.3%
3593230 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.58 50.0 4.06e-01 95.9% 60.0%
3783529 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.58 49.0 3.22e-01 94.5% 81.9%
4159500 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.58 46.0 4.38e-01 94.5% 74.1%
5058842 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.57 47.0 4.47e-01 93.2% 82.2%
3953342 101.1.4.61 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF27182 0.57 49.0 3.95e-01 97.3% 50.4%
4667176 3755.3.1.517 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF29650 0.57 47.0 3.29e-01 94.5% 27.5%
4998520 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.55 43.0 4.28e-01 94.5% 82.7%
5044572 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.55 47.0 4.23e-01 98.6% 81.0%
5032368 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.55 41.0 4.35e-01 93.2% 92.3%
5050430 109.32.1.1 alpha superhelices › Repetitive alpha hairpins › Alkylsulfatase SdsA1 linker domain › Alkylsulfatase SdsA1 linker domain › Alkyl_sulf_dimr 0.55 47.0 4.18e-01 95.9% 88.6%
3261521 109.4.1.167 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rif1_N 0.54 43.0 2.81e-01 87.7% 49.1%
165995 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.54 41.0 4.14e-01 94.5% 82.7%
3794988 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.54 47.0 3.89e-01 95.9% 67.2%
4258357 109.4.1.206 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO 0.53 42.0 3.31e-01 90.4% 40.0%
3615985 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.52 44.0 3.90e-01 97.3% 77.3%
4977678 192.1.1.50 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › EMC3_TMCO1 0.52 44.0 3.52e-01 100.0% 85.6%
3883962 109.2.1.24 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › TED_complement 0.52 43.0 2.94e-01 97.3% 23.9%
3678972 604.6.1.38 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › CASP_dom 0.51 44.0 3.85e-01 97.3% 78.9%
4943739 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.50 42.0 3.63e-01 98.6% 93.6%
D4 high residues 707-781
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03288.23 best Pox_D5 34.0 4.50e-08 86.7% 59.3%
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dp7P00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 70.0 7.02e-01 98.7% 97.4%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 6.04e-01 97.3% 81.1%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 5.12e-01 97.3% 63.0%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.56e-01 97.3% 76.7%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.84e-01 97.3% 78.6%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 4.54e-01 97.3% 46.3%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.97e-01 98.7% 82.4%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.70 61.0 6.05e-01 97.3% 93.8%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 5.08e-01 97.3% 63.8%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 4.38e-01 97.3% 44.4%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 6.01e-01 97.3% 92.6%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.65e-01 96.0% 96.9%
3gz5B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 5.32e-01 93.3% 83.8%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.17e-01 97.3% 41.2%
4fcyB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 49.0 5.25e-01 97.3% 90.8%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 4.11e-01 97.3% 41.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.84e-01 97.3% 64.8%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.95e-01 97.3% 68.0%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 4.97e-01 97.3% 72.8%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.21e-01 97.3% 46.7%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 5.21e-01 97.3% 95.2%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 5.06e-01 97.3% 73.5%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 5.07e-01 97.3% 83.1%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 5.48e-01 97.3% 86.2%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 5.34e-01 97.3% 96.8%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.23e-01 97.3% 46.8%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 4.75e-01 97.3% 70.8%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.05e-01 97.3% 44.3%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.81e-01 97.3% 73.6%
3bz6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 56.0 5.29e-01 97.3% 85.6%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 5.21e-01 97.3% 84.3%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 4.87e-01 97.3% 68.9%
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 5.04e-01 97.3% 92.6%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.43e-01 97.3% 61.5%
3d5lB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 3.65e-01 93.3% 50.0%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.71e-01 98.7% 95.3%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.60 52.0 5.13e-01 97.3% 91.4%
3frrA00 1.20.1260.60 Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 0.59 41.0 3.12e-01 72.0% 80.1%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 4.87e-01 97.3% 100.0%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 4.34e-01 97.3% 60.8%
1g4dA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.52e-01 81.3% 89.9%
1qd1B02 3.30.70.670 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain 0.57 48.0 3.87e-01 92.0% 60.7%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.57 48.0 4.69e-01 97.3% 88.2%
3fncB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 43.0 3.40e-01 97.3% 39.1%
5teqA01 3.30.470.110 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.56 39.0 2.85e-01 74.7% 28.8%
3solA00 1.20.58.1630 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS 0.55 49.0 4.62e-01 100.0% 93.4%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.54 45.0 4.36e-01 93.3% 80.0%
4mspB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 45.0 4.50e-01 90.7% 90.7%
4dddA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 39.0 3.25e-01 78.7% 100.0%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.53 39.0 3.72e-01 93.3% 67.8%
1wtyA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.53 40.0 3.46e-01 80.0% 87.1%
3egoA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.53 46.0 4.00e-01 100.0% 90.1%
1ni5A02 1.20.59.20 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › 0.53 43.0 4.18e-01 90.7% 82.6%
2fsrA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 42.0 3.33e-01 92.0% 91.8%
2qmwA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 39.0 3.66e-01 89.3% 64.5%
2be4A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 44.0 4.08e-01 100.0% 76.2%
4kigA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 3.34e-01 94.7% 50.0%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 39.0 3.90e-01 96.0% 80.5%
5u3fB01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.51 44.0 3.64e-01 98.7% 75.0%
5tdeA02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.50 32.0 3.20e-01 96.0% 59.8%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.50 37.0 3.48e-01 96.0% 63.8%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 37.0 2.90e-01 94.7% 36.2%
3h2bB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 42.0 3.17e-01 96.0% 39.3%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4973290 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.93 83.0 8.65e-01 98.7% 100.0%
3954610 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.91 83.0 8.38e-01 100.0% 96.0%
5081315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.91 84.0 8.41e-01 97.3% 98.7%
5003621 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.89 84.0 7.68e-01 100.0% 80.0%
5035043 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 78.0 7.82e-01 94.7% 100.0%
5029778 101.1.2.43 alpha arrays › HTH › HTH › winged helix domain › Pox_D5 0.88 81.0 7.59e-01 100.0% 87.8%
5022021 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 81.0 6.87e-01 100.0% 69.6%
3249045 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.82 76.0 6.15e-01 98.7% 58.5%
3688358 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.81 74.0 7.25e-01 98.7% 92.5%
3993626 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.81 74.0 7.08e-01 100.0% 88.2%
3689786 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 71.0 5.41e-01 100.0% 42.9%
3498779 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.80 73.0 6.99e-01 100.0% 92.9%
3883278 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.80 73.0 6.71e-01 100.0% 80.0%
3729476 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.79 72.0 6.18e-01 100.0% 65.2%
3537242 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.78 70.0 6.40e-01 100.0% 77.0%
3898745 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.78 70.0 6.46e-01 100.0% 84.2%
4012878 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 71.0 6.11e-01 100.0% 66.1%
3177239 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.77 69.0 5.70e-01 100.0% 56.3%
3636754 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.77 68.0 6.65e-01 96.0% 87.5%
4955909 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 70.0 6.14e-01 100.0% 78.2%
5011183 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 69.0 6.01e-01 98.7% 76.4%
4173782 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 68.0 5.85e-01 98.7% 73.0%
5055466 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 68.0 5.85e-01 98.7% 80.9%
3938377 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.75 68.0 6.55e-01 100.0% 89.4%
5029327 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.75 67.0 5.73e-01 98.7% 78.3%
4976651 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 6.57e-01 97.3% 98.6%
4961270 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 67.0 5.95e-01 98.7% 81.0%
3982565 101.1.1.202 alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 0.74 50.0 5.62e-01 73.3% 96.4%
4974161 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 67.0 5.61e-01 100.0% 87.1%
4373647 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 65.0 5.53e-01 97.3% 65.0%
4284507 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 66.0 5.86e-01 98.7% 81.0%
4928669 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 66.0 5.88e-01 98.7% 77.1%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 66.0 5.63e-01 100.0% 93.3%
4943354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 63.0 6.23e-01 97.3% 89.9%
3875839 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 66.0 5.64e-01 97.3% 67.0%
3605279 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 66.0 4.97e-01 100.0% 93.1%
3479163 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 5.36e-01 97.3% 66.9%
4980135 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 5.38e-01 97.3% 63.9%
5050129 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 66.0 5.76e-01 100.0% 82.7%
4966192 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 65.0 5.56e-01 97.3% 70.4%
4109840 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 63.0 5.76e-01 97.3% 77.0%
3191548 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.72 65.0 6.27e-01 97.3% 88.1%
4983039 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 64.0 5.86e-01 98.7% 81.8%
5074322 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 58.0 5.77e-01 97.3% 83.5%
4487383 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 64.0 5.67e-01 100.0% 91.8%
4962870 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 64.0 5.36e-01 97.3% 64.2%
4503351 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 63.0 5.63e-01 97.3% 70.5%
3942599 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 54.0 5.31e-01 97.3% 75.0%
4982781 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 64.0 5.58e-01 98.7% 76.4%
4314672 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 64.0 5.66e-01 98.7% 72.4%
4672256 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 64.0 5.49e-01 98.7% 73.0%
4061942 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 63.0 5.31e-01 98.7% 67.2%
4933997 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 64.0 5.43e-01 100.0% 88.3%
5073929 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 62.0 5.49e-01 98.7% 74.5%
3649376 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 64.0 5.00e-01 98.7% 53.3%
4956520 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 64.0 5.60e-01 100.0% 76.4%
3479827 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 5.48e-01 97.3% 76.1%
5005519 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 58.0 5.12e-01 97.3% 61.4%
3576823 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.70 57.0 4.79e-01 97.3% 51.9%
5052010 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 6.01e-01 98.7% 91.3%
4996559 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 62.0 6.23e-01 97.3% 97.3%
5045315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.28e-01 97.3% 65.2%
4081838 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 62.0 6.22e-01 97.3% 97.3%
3625612 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 63.0 5.67e-01 98.7% 81.0%
4205244 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.69 53.0 5.34e-01 86.7% 82.7%
4948099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 62.0 5.48e-01 100.0% 82.7%
3550061 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.69 56.0 5.05e-01 97.3% 63.8%
4525548 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 4.99e-01 97.3% 65.0%
3927517 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 63.0 5.68e-01 100.0% 82.0%
None 0.68 62.0 5.58e-01 98.7% 81.0%
5077022 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 57.0 5.21e-01 97.3% 70.0%
3784677 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.68 60.0 4.26e-01 97.3% 37.3%
3948523 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 5.89e-01 94.7% 100.0%
4996031 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 5.44e-01 94.7% 80.0%
5001284 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 57.0 4.51e-01 97.3% 44.4%
3579831 101.1.2.188 alpha arrays › HTH › HTH › winged helix domain › Roquin_1_2-like_ROQ 0.67 57.0 4.97e-01 97.3% 60.8%
4978424 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 56.0 4.86e-01 97.3% 59.2%
4310506 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.66 58.0 4.14e-01 97.3% 36.9%
4971686 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 55.0 4.99e-01 97.3% 66.7%
3410283 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.66 55.0 4.79e-01 97.3% 60.9%
4588402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 5.83e-01 97.3% 98.7%
2494143 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 54.0 4.77e-01 97.3% 62.2%
2593 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.65 51.0 4.21e-01 97.3% 46.7%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 4.33e-01 97.3% 44.4%
3744213 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.65 55.0 4.49e-01 97.3% 50.0%
5014176 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 55.0 4.36e-01 97.3% 45.0%
5051534 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 55.0 4.17e-01 97.3% 38.9%
4963293 101.1.2.921 alpha arrays › HTH › HTH › winged helix domain › DUF7109 0.63 55.0 5.26e-01 100.0% 96.7%
3587826 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 53.0 4.80e-01 97.3% 66.7%
3623089 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.63 54.0 4.42e-01 97.3% 50.3%
4976218 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 53.0 4.59e-01 97.3% 60.0%
3257174 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.63 53.0 4.53e-01 97.3% 73.1%
3786852 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.62 53.0 5.11e-01 97.3% 84.7%
3419613 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 54.0 4.96e-01 98.7% 76.0%
4934352 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 50.0 3.91e-01 97.3% 39.4%
3206556 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.61 52.0 3.71e-01 98.7% 51.6%
3948669 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.60 43.0 3.74e-01 86.7% 48.7%
D5 medium residues 520-651
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 46.1 9.80e-12 89.4% 100.0%