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IMGVR_UViG_3300009693_000413-3300009693-Ga0116141_100095494

Arc-Vir

IMGVR_UViG_3300009693_000413-3300009693-Ga0116141_100095494

Quality

86.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-88
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hgkE00 1.20.1280.110 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.65 49.0 4.64e-01 81.2% 85.7%
2fq4A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 56.0 4.42e-01 100.0% 67.9%
8h4pA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.62 52.0 3.46e-01 100.0% 43.4%
1imvA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.55 42.0 3.01e-01 84.4% 37.9%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.53e-01 78.1% 81.5%
4bxoA01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 41.0 3.35e-01 95.3% 63.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3473900 364.1.1.1 few secondary structure elements › TAZ domain › TAZ domain › TAZ domain › zf-TAZ 0.55 42.0 3.80e-01 84.4% 72.2%
3908678 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.52 40.0 2.37e-01 87.5% 26.8%
3833404 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.51 38.0 3.59e-01 84.4% 74.1%
3339407 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.51 37.0 2.53e-01 76.6% 23.3%