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IMGVR_UViG_3300009706_002605-3300009706-Ga0115002_100181747

Arc-Vir

IMGVR_UViG_3300009706_002605-3300009706-Ga0115002_100181747

Quality

65.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 179-331
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00188.33 best CAP 26.4 1.50e-05 90.2% 97.5%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.94 77.0 6.04e-01 100.0% 45.5%
4d53A00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.91 74.0 7.95e-01 99.3% 96.2%
5vhgA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.82 68.0 6.91e-01 97.4% 87.3%
5jysA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.77 60.0 6.31e-01 95.4% 87.2%
3s6sB00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.76 59.0 5.65e-01 98.0% 70.3%
1cfeA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.75 59.0 6.27e-01 94.8% 91.9%
4p27A00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.74 64.0 6.46e-01 97.4% 89.0%
4g2uA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.65 61.0 5.44e-01 100.0% 76.2%
2vqeC02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.61 37.0 4.42e-01 77.8% 91.0%
1vr4E00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.59 34.0 4.31e-01 83.0% 95.7%
7pwfD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.58 34.0 4.32e-01 77.1% 100.0%
3jamD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.57 36.0 3.80e-01 77.8% 69.9%
2pofA00 3.30.428.30 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT family - CDH-like 0.54 41.0 3.67e-01 100.0% 55.5%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.53 36.0 4.16e-01 84.3% 94.7%
3ix3A00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.53 33.0 3.31e-01 83.0% 57.7%
1tedA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 37.0 3.82e-01 83.0% 75.2%
2q0oA01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 32.0 3.18e-01 81.7% 54.8%
1u0mA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 36.0 3.70e-01 83.7% 75.3%
2va0A00 3.30.450.160 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 33.0 3.91e-01 80.4% 99.0%
4kc5B01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 39.0 2.79e-01 80.4% 43.7%
3euoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 39.0 3.90e-01 84.3% 79.0%
3wxyA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 38.0 3.86e-01 85.0% 78.6%
3aleA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 35.0 3.62e-01 83.7% 76.2%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4031162 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.95 79.0 8.58e-01 98.7% 100.0%
1031145 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.95 77.0 8.26e-01 100.0% 95.5%
5022449 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.94 70.0 6.12e-01 97.4% 55.2%
5015571 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.91 87.0 8.77e-01 98.0% 100.0%
1697211 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.91 74.0 7.95e-01 99.3% 96.2%
4942971 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.90 86.0 8.27e-01 98.7% 100.0%
5084002 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.89 75.0 7.99e-01 100.0% 97.8%
3235186 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.87 61.0 7.22e-01 94.1% 100.0%
3992804 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.87 61.0 7.22e-01 95.4% 100.0%
3412746 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.85 71.0 7.19e-01 100.0% 87.3%
3968107 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.85 75.0 7.87e-01 98.7% 100.0%
3939771 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.83 66.0 6.89e-01 96.1% 87.5%
3398052 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.83 67.0 6.71e-01 96.7% 82.5%
3964094 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.83 72.0 7.31e-01 94.1% 92.0%
5029848 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.82 72.0 6.93e-01 98.7% 81.2%
3405770 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.82 69.0 6.98e-01 100.0% 86.3%
3278331 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.82 75.0 7.70e-01 100.0% 99.3%
3239073 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.82 65.0 6.82e-01 96.7% 88.6%
5008575 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.82 69.0 7.30e-01 98.7% 97.1%
3938651 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.81 67.0 6.55e-01 98.7% 79.1%
3934681 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.81 68.0 6.18e-01 99.3% 67.7%
3532103 273.1.1.2 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CEP76_C 0.81 69.0 7.25e-01 100.0% 97.1%
3712894 273.1.1.2 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CEP76_C 0.81 69.0 7.24e-01 100.0% 97.1%
3937255 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.80 62.0 6.26e-01 94.8% 80.0%
3926699 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.80 66.0 6.18e-01 98.7% 71.7%
3931530 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.80 60.0 6.82e-01 95.4% 100.0%
3925453 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.80 63.0 6.62e-01 100.0% 88.6%
3938738 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.80 66.0 6.33e-01 99.3% 76.5%
3478962 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.79 68.0 6.59e-01 100.0% 81.8%
3915349 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.79 67.0 6.46e-01 100.0% 79.4%
3477325 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.78 66.0 6.52e-01 98.0% 83.5%
3495541 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.78 66.0 6.67e-01 97.4% 88.0%
3248692 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.78 74.0 6.86e-01 98.0% 90.3%
3937257 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.78 63.0 6.40e-01 97.4% 84.7%
4929542 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.78 75.0 7.47e-01 99.3% 98.1%
2105733 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.78 61.0 6.45e-01 98.7% 89.1%
3937906 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.78 63.0 5.96e-01 98.7% 71.7%
3220818 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.78 70.0 6.53e-01 99.3% 78.1%
4081037 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.78 64.0 6.56e-01 94.8% 89.0%
5012996 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.77 54.0 6.19e-01 99.3% 96.5%
3932803 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.77 63.0 5.90e-01 98.7% 71.7%
3928387 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.77 67.0 6.69e-01 95.4% 89.0%
3448585 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.76 69.0 7.11e-01 96.7% 99.3%
4001525 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.76 66.0 4.90e-01 97.4% 39.4%
3926346 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.75 65.0 6.66e-01 99.3% 92.0%
3656682 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.75 65.0 6.03e-01 100.0% 74.6%
3812911 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.75 63.0 6.65e-01 96.7% 96.4%
3427297 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.74 65.0 6.69e-01 97.4% 96.6%
3997567 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.73 64.0 5.98e-01 97.4% 75.7%
3616880 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.73 70.0 6.42e-01 99.3% 81.1%
3586795 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.72 67.0 6.27e-01 100.0% 81.9%
3588250 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.72 65.0 6.59e-01 100.0% 96.7%
3992603 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.71 55.0 4.37e-01 99.3% 42.5%
3416151 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.70 65.0 6.33e-01 96.1% 92.7%
3449329 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.68 62.0 6.16e-01 100.0% 91.9%
3718069 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.67 64.0 6.44e-01 100.0% 98.7%
3514554 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.65 44.0 5.11e-01 82.4% 92.2%
4027295 872.3.1.5 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.63 36.0 4.52e-01 83.7% 93.3%
3482573 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.63 35.0 4.47e-01 86.3% 93.3%
3594297 872.3.1.5 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.62 36.0 4.46e-01 83.7% 91.6%
3588078 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.61 35.0 4.52e-01 86.9% 96.7%
4463842 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.61 37.0 4.06e-01 77.8% 73.6%
3943020 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.57 35.0 3.35e-01 85.0% 51.4%
3382026 304.55.1.20 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N, REP_ORF2-G2P 0.55 28.0 2.92e-01 80.4% 49.0%
2999708 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.54 33.0 3.23e-01 84.3% 52.3%
4959305 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.53 29.0 3.15e-01 92.8% 62.4%
1175416 7581.1.1.7 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Ketoacyl-synt_C 0.52 40.0 3.84e-01 83.0% 68.5%
4958412 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.51 27.0 2.95e-01 90.8% 60.0%
1146572 304.152.1.1 a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 0.50 26.0 2.90e-01 90.8% 60.3%
4878204 7581.1.1.6 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C 0.50 36.0 3.67e-01 84.3% 77.2%
D2 high residues 418-579
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00188.33 best CAP 67.4 3.00e-18 91.4% 89.1%
D3 medium residues 8-100
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01428.24 best zf-AN1 31.4 2.30e-07 33.3% 80.0%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cl3A00 1.25.10.90 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › 0.61 44.0 3.33e-01 75.3% 68.0%
2l6jA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 43.0 4.08e-01 78.5% 73.9%
4cj0A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.56 49.0 3.22e-01 100.0% 51.7%
3t69A02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.56 40.0 2.99e-01 74.2% 33.6%
3x17A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.56 48.0 3.14e-01 97.8% 53.1%
1rq5A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 43.0 2.76e-01 96.8% 70.4%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3371187 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 51.0 4.32e-01 75.3% 80.0%
4630964 610.1.1.1 alpha arrays › ERP29 C domain-like › ERP29 C domain-like › ERP29 C domain-like › ERp29 0.59 43.0 4.70e-01 89.2% 94.7%
4943339 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 41.0 4.04e-01 72.0% 92.0%
3588464 604.39.1.5 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt 0.53 40.0 3.38e-01 81.7% 75.9%
279247 377.1.1.11 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.53 37.0 3.09e-01 72.0% 62.3%
4029822 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 45.0 2.90e-01 98.9% 84.4%
4597950 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.52 40.0 3.29e-01 81.7% 58.2%
3987616 377.1.1.11 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.52 40.0 3.27e-01 81.7% 58.2%
3815876 109.4.1.1353 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_11, TPR_16 0.51 43.0 3.27e-01 93.5% 43.0%
4222772 377.1.1.11 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.51 35.0 2.96e-01 72.0% 64.2%
4977081 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.51 37.0 2.63e-01 78.5% 78.4%