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IMGVR_UViG_3300009710_000926-3300009710-Ga0116192_10082884
Arc-VirIMGVR_UViG_3300009710_000926-3300009710-Ga0116192_10082884
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 64-114
D2
medium
residues 128-168
Domain cluster:
representative
D3
medium
residues 193-265_383-416
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.75 | 44.0 | 3.89e-01 | 99.1% | 40.8% |
| 6u6pA01 | 3.30.1070.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE | 0.74 | 44.0 | 5.04e-01 | 96.3% | 80.8% |
| 2nykA02 | 2.60.40.2530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 32.0 | 3.49e-01 | 97.2% | 51.7% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.69 | 40.0 | 4.38e-01 | 99.1% | 69.8% |
| 3ejjX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 36.0 | 3.86e-01 | 99.1% | 58.9% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 35.0 | 4.02e-01 | 96.3% | 67.9% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.66 | 44.0 | 4.32e-01 | 100.0% | 61.3% |
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 33.0 | 3.68e-01 | 100.0% | 60.5% |
| 5t89X05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 41.0 | 4.11e-01 | 99.1% | 63.6% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.63 | 47.0 | 4.31e-01 | 100.0% | 59.4% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.62 | 45.0 | 4.25e-01 | 100.0% | 62.3% |
| 3qw9B00 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.62 | 44.0 | 3.83e-01 | 99.1% | 48.2% |
| 3u83A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 36.0 | 3.73e-01 | 100.0% | 61.4% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 36.0 | 3.53e-01 | 99.1% | 54.2% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.60 | 36.0 | 4.23e-01 | 99.1% | 92.6% |
| 4bsjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 42.0 | 4.01e-01 | 99.1% | 63.4% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 34.0 | 3.64e-01 | 98.1% | 65.2% |
| 1g84A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 35.0 | 3.54e-01 | 100.0% | 58.1% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.59 | 40.0 | 3.25e-01 | 99.1% | 35.7% |
| 4of8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 33.0 | 3.42e-01 | 100.0% | 56.3% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 40.0 | 4.05e-01 | 98.1% | 70.9% |
| 2di8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 30.0 | 3.17e-01 | 94.4% | 53.2% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 37.0 | 3.85e-01 | 100.0% | 69.6% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 32.0 | 3.34e-01 | 99.1% | 60.0% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 41.0 | 4.11e-01 | 96.3% | 74.8% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.56 | 33.0 | 2.65e-01 | 99.1% | 27.8% |
| 2rb7A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 4.06e-01 | 96.3% | 75.7% |
| 5c50B00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.55 | 39.0 | 3.26e-01 | 73.8% | 99.5% |
| 2wyhA05 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 40.0 | 3.75e-01 | 98.1% | 61.2% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.54 | 33.0 | 3.94e-01 | 100.0% | 100.0% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.76e-01 | 98.1% | 68.8% |
| 7d58G01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.54 | 36.0 | 4.03e-01 | 97.2% | 97.3% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 3.72e-01 | 98.1% | 68.1% |
| 7l0jB01 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.53 | 29.0 | 3.17e-01 | 91.6% | 61.8% |
| 2wngA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 31.0 | 3.13e-01 | 99.1% | 56.1% |
| 3ct9A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.85e-01 | 100.0% | 76.6% |
| 3pfoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 40.0 | 3.83e-01 | 95.3% | 69.5% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5041371 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.84 | 81.0 | 5.53e-01 | 100.0% | 74.8% |
| 3088027 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.78 | 74.0 | 5.34e-01 | 100.0% | 70.1% |
| 5081487 | 2485.3.1.10 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 | 0.78 | 74.0 | 5.29e-01 | 100.0% | 89.0% |
| 3603456 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.77 | 45.0 | 4.85e-01 | 99.1% | 68.9% |
| 3946670 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.76 | 72.0 | 5.16e-01 | 100.0% | 74.2% |
| 4313471 | 2485.3.1.11 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like | 0.75 | 71.0 | 4.99e-01 | 100.0% | 66.3% |
| 2651377 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.75 | 71.0 | 4.96e-01 | 100.0% | 70.0% |
| 2538948 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.75 | 70.0 | 4.94e-01 | 100.0% | 67.9% |
| 4241362 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.74 | 69.0 | 4.87e-01 | 100.0% | 70.8% |
| 4929755 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.71 | 67.0 | 4.81e-01 | 100.0% | 74.9% |
| 5083051 | 2485.3.1.12 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF6260 | 0.71 | 66.0 | 4.70e-01 | 99.1% | 80.7% |
| 4890673 | 2485.3.1.9 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 | 0.71 | 67.0 | 4.50e-01 | 100.0% | 67.9% |
| 3991844 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 42.0 | 4.41e-01 | 98.1% | 64.0% |
| 5081698 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.70 | 66.0 | 4.64e-01 | 100.0% | 72.1% |
| 3970088 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 40.0 | 4.27e-01 | 99.1% | 63.2% |
| 3110786 | 2485.3.1.14 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp10A-like | 0.70 | 65.0 | 4.47e-01 | 100.0% | 69.8% |
| 3623510 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.70 | 44.0 | 4.47e-01 | 98.1% | 63.8% |
| 3581950 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.70 | 39.0 | 4.04e-01 | 96.3% | 58.2% |
| 3822456 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.70 | 44.0 | 4.37e-01 | 97.2% | 60.9% |
| 3977985 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.68 | 63.0 | 4.33e-01 | 100.0% | 68.1% |
| 2988313 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.68 | 64.0 | 4.61e-01 | 100.0% | 68.8% |
| 3949263 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.67 | 43.0 | 4.40e-01 | 98.1% | 65.7% |
| 3603036 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.67 | 62.0 | 4.62e-01 | 100.0% | 69.8% |
| 3827396 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 42.0 | 4.23e-01 | 98.1% | 61.8% |
| 3931456 | 304.42.1.1 ↗ | a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC | 0.64 | 48.0 | 4.15e-01 | 99.1% | 50.0% |
| 3496203 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.64 | 46.0 | 4.79e-01 | 100.0% | 81.0% |
| 3977799 | 304.109.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › YecR | 0.64 | 42.0 | 4.63e-01 | 96.3% | 84.7% |
| 3705552 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 36.0 | 3.10e-01 | 99.1% | 35.8% |
| 4941817 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 40.0 | 4.02e-01 | 99.1% | 62.4% |
| 3587769 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.63 | 57.0 | 4.14e-01 | 100.0% | 70.7% |
| 4081839 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.63 | 39.0 | 3.86e-01 | 98.1% | 58.4% |
| 3391269 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.63 | 42.0 | 4.16e-01 | 99.1% | 64.3% |
| 3701983 | 304.153.1.0 ↗ | a+b two layers › Alpha-beta plaits › Collagenase G catalytic helper subdomain › Collagenase G catalytic helper subdomain | 0.63 | 52.0 | 4.37e-01 | 97.2% | 54.3% |
| 3850546 | 1095.1.1.2 ↗ | extended segments › Copper resistance protein ScsC N-terminal region › Copper resistance protein ScsC N-terminal region › Copper resistance protein ScsC N-terminal region › CATSPERG_Ig-like | 0.62 | 42.0 | 3.68e-01 | 100.0% | 45.6% |
| 3865666 | 11.1.1.639 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERG_Ig-like | 0.62 | 42.0 | 3.68e-01 | 100.0% | 45.6% |
| 3705145 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.62 | 52.0 | 4.41e-01 | 98.1% | 54.4% |
| 5000641 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.62 | 36.0 | 2.67e-01 | 93.5% | 22.3% |
| 3075730 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.61 | 55.0 | 3.90e-01 | 100.0% | 71.6% |
| 3624618 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.60 | 39.0 | 3.14e-01 | 97.2% | 32.1% |
| 3850650 | 304.8.1.60 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ADGRG2_N | 0.58 | 41.0 | 3.90e-01 | 99.1% | 61.5% |
| 3992440 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.57 | 46.0 | 3.79e-01 | 98.1% | 48.4% |
| 4447560 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.57 | 44.0 | 4.47e-01 | 98.1% | 84.8% |
| 3847078 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.56 | 33.0 | 2.92e-01 | 99.1% | 37.5% |
| 3466869 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.55 | 39.0 | 3.25e-01 | 84.1% | 42.7% |
| 5073045 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.54 | 32.0 | 2.64e-01 | 100.0% | 29.5% |
| 4992010 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 41.0 | 3.93e-01 | 98.1% | 74.4% |
| 3889150 | 11.1.1.596 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VEGFR-1-like_5th | 0.51 | 38.0 | 3.67e-01 | 98.1% | 68.0% |
| 5013821 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.51 | 41.0 | 3.99e-01 | 99.1% | 77.5% |
D4
medium
residues 266-382_417-434
Domain cluster:
rep: IMGVR_UViG_3300045988_180044-3300045988-Ga0495776_185241_19297_20526__D170-267_306-316
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pk8A00 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.83 | 55.0 | 6.51e-01 | 84.4% | 96.8% |
| 7mh2A01 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.76 | 51.0 | 6.15e-01 | 87.4% | 100.0% |
| 1ohgA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.74 | 56.0 | 6.28e-01 | 97.0% | 100.0% |
| 3bjqA00 | 3.90.1690.10 | Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain | 0.69 | 65.0 | 4.91e-01 | 100.0% | 60.1% |
| 1yueA03 | 3.30.2320.40 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.66 | 55.0 | 5.85e-01 | 97.0% | 99.2% |
| 2kjzA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.64 | 28.0 | 3.93e-01 | 98.5% | 94.4% |
| 3bqwA02 | 3.30.1930.10 | Alpha Beta › 2-Layer Sandwich › capsid protein of prophage fold › capsid protein of prophage domain | 0.60 | 55.0 | 5.47e-01 | 97.0% | 100.0% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 32.0 | 3.95e-01 | 85.9% | 90.4% |
| 3k12D00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.56 | 43.0 | 4.55e-01 | 83.0% | 92.5% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.55 | 30.0 | 3.86e-01 | 83.0% | 92.3% |
| 2qi2A03 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.55 | 34.0 | 3.88e-01 | 85.2% | 85.1% |
| 2ewcB00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.54 | 42.0 | 4.39e-01 | 83.0% | 95.9% |
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 31.0 | 3.76e-01 | 83.7% | 91.6% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 21.0 | 2.90e-01 | 75.6% | 75.4% |
| 1pf5A00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.53 | 42.0 | 4.29e-01 | 85.2% | 95.4% |
| 3i3fB00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.53 | 41.0 | 4.27e-01 | 84.4% | 89.8% |
| 3lybC00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.52 | 42.0 | 4.27e-01 | 86.7% | 99.3% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.51 | 24.0 | 3.40e-01 | 83.7% | 93.8% |
| 2ra9A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.51 | 25.0 | 3.19e-01 | 96.3% | 82.2% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.51 | 26.0 | 3.41e-01 | 86.7% | 94.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2968064 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.75 | 71.0 | 5.10e-01 | 100.0% | 59.5% |
| 2989372 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.69 | 64.0 | 4.80e-01 | 98.5% | 58.9% |
| 2989340 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.67 | 61.0 | 4.61e-01 | 97.8% | 61.0% |
| 2989363 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.67 | 62.0 | 4.63e-01 | 98.5% | 61.0% |
| 2724409 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.62 | 57.0 | 4.48e-01 | 98.5% | 55.5% |
| 3008074 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.60 | 26.0 | 3.64e-01 | 97.8% | 89.3% |
| 4995654 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 34.0 | 4.15e-01 | 70.4% | 100.0% |
| 4957877 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 30.0 | 3.91e-01 | 84.4% | 98.6% |
| 4611993 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.55 | 39.0 | 3.71e-01 | 71.9% | 83.1% |
| 3970173 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.55 | 42.0 | 4.41e-01 | 82.2% | 90.8% |
| 4937130 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.54 | 21.0 | 2.81e-01 | 73.3% | 64.6% |
| 3288386 | 301.7.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP | 0.53 | 43.0 | 4.31e-01 | 85.2% | 98.5% |
| 6993 | 301.7.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP | 0.53 | 42.0 | 4.29e-01 | 85.2% | 95.4% |
| 4301837 | 55.1.1.1 ↗ | beta barrels › Urease metallochperone UreE-N › Urease metallochperone UreE-N › Urease metallochperone UreE-N › UreE_N | 0.51 | 27.0 | 3.38e-01 | 99.3% | 92.9% |
| 4566699 | 2004.1.1.422 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, RsgA_GTPase | 0.50 | 42.0 | 3.42e-01 | 91.9% | 54.4% |