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IMGVR_UViG_3300009711_000154-3300009711-Ga0116166_10101429

Arc-Vir

IMGVR_UViG_3300009711_000154-3300009711-Ga0116166_10101429

Quality

72.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
D2 medium residues 56-120
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1av4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 40.0 2.47e-01 75.4% 31.4%
1lwdA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.56 39.0 2.44e-01 75.4% 29.3%
7t4dA01 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.53 39.0 2.60e-01 80.0% 51.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083051 2485.3.1.12 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF6260 0.60 46.0 3.01e-01 84.6% 20.3%
4156749 3234.1.1.2 a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N 0.58 37.0 2.49e-01 72.3% 14.0%
3387077 327.13.1.2 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF_C 0.54 38.0 3.11e-01 75.4% 71.1%
3594852 521.1.1.0 beta sandwiches › Ecotin, trypsin inhibitor › Ecotin, trypsin inhibitor › Ecotin, trypsin inhibitor 0.52 35.0 2.85e-01 70.8% 40.3%