Back to structures

IMGVR_UViG_3300009713_000269-3300009713-Ga0116163_10112391

Arc-Vir

IMGVR_UViG_3300009713_000269-3300009713-Ga0116163_10112391

Quality

85.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-70
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00293.35 best NUDIX 40.5 3.80e-10 100.0% 36.6%
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3edsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.93 77.0 5.52e-01 100.0% 34.6%
5cfjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.92 86.0 6.04e-01 100.0% 40.7%
1vc9A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.91 80.0 5.91e-01 100.0% 40.2%
3eesA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.91 84.0 6.09e-01 100.0% 40.5%
4k6eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.91 84.0 5.85e-01 100.0% 35.4%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.91 85.0 6.03e-01 100.0% 39.4%
4dywA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.91 84.0 6.09e-01 100.0% 40.3%
1k2eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.90 79.0 5.47e-01 100.0% 32.2%
6uufA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.90 82.0 5.73e-01 100.0% 38.2%
3h95A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.90 82.0 5.95e-01 100.0% 40.5%
4hfqA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.90 77.0 5.54e-01 100.0% 35.3%
4nfwF00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.89 80.0 5.55e-01 100.0% 33.3%
1q33A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.88 82.0 5.49e-01 100.0% 39.2%
1sjyA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.88 82.0 5.66e-01 100.0% 34.4%
2fmlA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.88 81.0 5.55e-01 100.0% 35.4%
5qoqA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.88 81.0 5.67e-01 100.0% 34.9%
3n77A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.88 79.0 5.68e-01 100.0% 38.3%
3cngC02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.88 79.0 5.67e-01 100.0% 36.4%
3grnA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.88 80.0 5.74e-01 100.0% 39.9%
1v8wA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.88 80.0 5.57e-01 100.0% 34.4%
2kdvA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.87 76.0 5.25e-01 100.0% 30.5%
3gwyB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.87 80.0 5.79e-01 100.0% 41.4%
2qjoB02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.87 80.0 5.65e-01 100.0% 35.9%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.87 79.0 5.32e-01 100.0% 30.0%
5anvA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.87 79.0 5.52e-01 100.0% 34.0%
4mpoB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.87 80.0 5.58e-01 100.0% 38.5%
3hhjB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.87 79.0 5.74e-01 100.0% 41.2%
1g0sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.86 79.0 5.15e-01 100.0% 29.9%
3fjyA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.86 79.0 5.44e-01 100.0% 45.9%
2b0vA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.86 79.0 5.55e-01 100.0% 35.1%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.86 78.0 5.26e-01 100.0% 29.8%
3j7ye00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.85 75.0 5.47e-01 100.0% 38.1%
3exqA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.85 77.0 5.50e-01 100.0% 37.5%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.85 77.0 5.09e-01 100.0% 29.4%
3fcmA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.85 75.0 5.06e-01 100.0% 28.3%
4kyxA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.85 77.0 5.54e-01 100.0% 38.1%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.84 75.0 5.11e-01 100.0% 29.8%
3gg6A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.84 74.0 5.35e-01 100.0% 36.8%
2yyhA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.83 76.0 5.47e-01 100.0% 39.9%
5deqA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 73.0 5.32e-01 100.0% 40.3%
3gz8C01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 73.0 5.33e-01 100.0% 42.6%
6u7tA03 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 65.0 5.02e-01 100.0% 43.0%
1ryaA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 64.0 4.59e-01 100.0% 33.1%
2cf5A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.54 43.0 3.01e-01 92.3% 64.1%
6p3xB01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 38.0 2.72e-01 96.2% 24.9%
5uaiA01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.50 38.0 2.62e-01 86.5% 81.1%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947875 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.95 88.0 6.37e-01 100.0% 41.5%
3978281 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.95 88.0 6.34e-01 100.0% 41.5%
3626342 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.93 87.0 6.07e-01 100.0% 37.2%
3407467 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.93 86.0 5.80e-01 100.0% 31.2%
4937578 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.92 86.0 6.14e-01 100.0% 38.5%
4939611 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.92 86.0 6.00e-01 100.0% 38.6%
3288269 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.92 85.0 6.03e-01 100.0% 37.9%
3275069 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.92 84.0 5.72e-01 100.0% 31.9%
4953121 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.92 84.0 6.19e-01 100.0% 41.6%
5011575 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.91 85.0 5.86e-01 100.0% 36.1%
4956149 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.91 84.0 5.87e-01 100.0% 36.0%
3288973 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.91 84.0 5.38e-01 100.0% 27.0%
3963831 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.91 84.0 6.01e-01 100.0% 40.0%
5081944 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.91 82.0 5.90e-01 100.0% 37.8%
143236 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.91 83.0 6.02e-01 100.0% 41.2%
149351 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.91 84.0 6.09e-01 100.0% 40.3%
6241 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.90 79.0 5.47e-01 100.0% 32.2%
3276905 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.90 84.0 5.33e-01 100.0% 38.4%
3509290 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.90 83.0 6.34e-01 100.0% 47.3%
4960496 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.90 83.0 5.79e-01 100.0% 34.7%
3286004 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.90 83.0 5.79e-01 100.0% 34.7%
1088859 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.90 77.0 5.54e-01 100.0% 35.3%
4937324 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 82.0 5.91e-01 100.0% 40.7%
4927145 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 82.0 5.79e-01 100.0% 35.9%
5025956 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 83.0 5.77e-01 100.0% 36.7%
4996467 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 83.0 5.84e-01 100.0% 37.1%
5031177 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 83.0 5.85e-01 100.0% 37.1%
4974972 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 82.0 5.73e-01 100.0% 34.9%
4937960 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 81.0 5.98e-01 100.0% 42.4%
3296180 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 81.0 5.57e-01 100.0% 31.9%
5005521 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.89 82.0 5.48e-01 100.0% 32.6%
1247709 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 82.0 5.52e-01 100.0% 30.6%
5051216 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 82.0 5.66e-01 100.0% 33.5%
4990890 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 82.0 5.61e-01 100.0% 34.6%
4943669 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.88 81.0 5.53e-01 100.0% 32.7%
6238 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 82.0 5.66e-01 100.0% 34.4%
2146540 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 81.0 5.77e-01 100.0% 37.4%
5061791 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 81.0 5.88e-01 100.0% 40.0%
5001210 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 81.0 5.66e-01 100.0% 36.0%
4934398 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 81.0 5.82e-01 100.0% 38.5%
5058232 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 80.0 5.83e-01 100.0% 41.5%
4965094 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.88 82.0 5.77e-01 100.0% 37.1%
None 0.88 80.0 5.57e-01 100.0% 34.4%
4948211 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.87 81.0 5.63e-01 100.0% 34.7%
3558321 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 81.0 5.48e-01 100.0% 31.5%
2120699 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 79.0 5.71e-01 100.0% 39.9%
5058019 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 80.0 5.65e-01 100.0% 36.1%
1247755 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 80.0 5.53e-01 100.0% 33.1%
5048122 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 80.0 5.45e-01 100.0% 31.7%
1726001 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 79.0 5.30e-01 100.0% 29.7%
3597706 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 78.0 5.30e-01 100.0% 30.5%
5039326 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 80.0 5.69e-01 100.0% 37.1%
1140638 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.87 80.0 5.58e-01 100.0% 38.5%
5017151 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.86 79.0 5.43e-01 100.0% 32.5%
3278000 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.86 79.0 5.08e-01 100.0% 26.5%
6244 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.86 79.0 5.57e-01 100.0% 35.6%
4980017 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.86 79.0 5.30e-01 100.0% 30.9%
3548806 221.4.1.7 a+b two layers › beta-Grasp › Nudix › Nudix › MRP-L46 0.86 79.0 4.90e-01 100.0% 59.1%
4429837 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.86 78.0 5.37e-01 100.0% 32.5%
4423374 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.85 77.0 5.47e-01 100.0% 35.9%
3285642 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.85 77.0 5.02e-01 100.0% 40.0%
4890538 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.85 78.0 5.10e-01 100.0% 76.9%
5047168 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.85 77.0 5.52e-01 100.0% 37.1%
3630477 221.4.1.7 a+b two layers › beta-Grasp › Nudix › Nudix › MRP-L46 0.84 77.0 4.73e-01 100.0% 57.8%
3989003 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.84 76.0 5.27e-01 100.0% 32.7%
3677800 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.84 76.0 5.30e-01 100.0% 41.6%
3951244 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.84 76.0 5.29e-01 100.0% 38.1%
3962194 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.83 75.0 5.21e-01 100.0% 37.3%
4980091 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 74.0 4.96e-01 100.0% 28.1%
3282969 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.80 70.0 5.15e-01 100.0% 43.7%
5062356 2492.1.1.5 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas 0.54 35.0 2.41e-01 100.0% 16.7%