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IMGVR_UViG_3300009715_000755-3300009715-Ga0116160_10105791
Arc-VirIMGVR_UViG_3300009715_000755-3300009715-Ga0116160_10105791
Identity
- Kingdom:
- archaea
Quality
69.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 103-221
Domain cluster:
rep: aot2015-SM02_SRR1761699_Peru_trim_clean_trim_clean_scaffold_10_curated_closed_complete_start-adj_prodigal-single.1__X__X__00350__D7-108
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d05A01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.57 | 26.0 | 3.16e-01 | 84.9% | 61.8% |
| 1x4pA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.54 | 25.0 | 3.21e-01 | 83.2% | 74.2% |
| 3vx4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 3.12e-01 | 88.2% | 36.8% |
| 7o06C01 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.52 | 26.0 | 2.90e-01 | 80.7% | 57.1% |
| 7mdhA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.52 | 40.0 | 3.49e-01 | 79.8% | 95.4% |
| 3dr6B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 37.0 | 3.31e-01 | 74.8% | 83.4% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 25.0 | 2.74e-01 | 77.3% | 55.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973075 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.53 | 38.0 | 4.04e-01 | 95.0% | 84.8% |
| 3594393 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.52 | 33.0 | 3.88e-01 | 93.3% | 93.8% |