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IMGVR_UViG_3300009767_000035-3300009767-Ga0116161_10023301
Arc-VirIMGVR_UViG_3300009767_000035-3300009767-Ga0116161_10023301
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-127
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08722.18 best | Tn7_TnsA-like_N | 45.3 | 1.50e-11 | 76.0% | 68.6% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vsrA00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.65 | 49.0 | 4.53e-01 | 88.5% | 62.7% |
| 3fvyA03 | 3.30.70.2600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 32.0 | 3.67e-01 | 75.0% | 69.3% |
| 2x9qB00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.55 | 50.0 | 3.87e-01 | 99.0% | 69.8% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 44.0 | 3.84e-01 | 84.6% | 73.0% |
| 3dorA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 46.0 | 3.50e-01 | 95.2% | 86.6% |
| 3fg9C01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 47.0 | 4.33e-01 | 100.0% | 92.9% |
| 4fdaA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 41.0 | 3.17e-01 | 83.7% | 37.9% |
| 2f6rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.37e-01 | 90.4% | 73.0% |
| 3ec3A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 37.0 | 3.60e-01 | 86.5% | 65.5% |
| 6uqyB01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 39.0 | 2.92e-01 | 82.7% | 98.9% |
| 8a26A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.50 | 39.0 | 2.87e-01 | 81.7% | 52.9% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5056125 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.73 | 53.0 | 4.90e-01 | 82.7% | 60.8% |
| 4545641 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.71 | 43.0 | 3.69e-01 | 83.7% | 37.1% |
| 4985335 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.67 | 49.0 | 3.71e-01 | 76.0% | 88.9% |
| 5048618 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 51.0 | 4.66e-01 | 88.5% | 64.4% |
| 3964769 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.64 | 46.0 | 3.86e-01 | 81.7% | 43.9% |
| 5011352 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.61 | 35.0 | 4.31e-01 | 74.0% | 88.2% |
| 5031799 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.60 | 35.0 | 4.23e-01 | 75.0% | 88.4% |
| 3287439 | 7579.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase | 0.59 | 49.0 | 3.53e-01 | 89.4% | 55.2% |
| 4934962 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.59 | 35.0 | 4.26e-01 | 76.9% | 93.8% |
| 5055194 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.57 | 34.0 | 4.10e-01 | 76.0% | 93.8% |
| 4993064 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 51.0 | 4.32e-01 | 100.0% | 89.1% |
| 3413653 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.57 | 43.0 | 3.99e-01 | 79.8% | 93.1% |
| 3738878 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.56 | 43.0 | 3.34e-01 | 80.8% | 86.5% |
| 4947002 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.56 | 33.0 | 3.93e-01 | 74.0% | 87.0% |
| 4680580 | 2004.1.1.415 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N | 0.55 | 42.0 | 3.29e-01 | 82.7% | 79.4% |
| 4992159 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.55 | 33.0 | 3.86e-01 | 75.0% | 92.3% |
| 3469356 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 49.0 | 4.21e-01 | 100.0% | 85.5% |
| 5016947 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 45.0 | 3.61e-01 | 88.5% | 63.5% |
| 3720313 | 2484.1.1.57 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt | 0.55 | 48.0 | 3.60e-01 | 100.0% | 87.3% |
| 3399787 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 43.0 | 3.76e-01 | 93.3% | 55.6% |
| 4951031 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.54 | 49.0 | 4.33e-01 | 100.0% | 90.0% |
| 3190050 | 7579.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase | 0.54 | 44.0 | 3.15e-01 | 88.5% | 42.8% |
| 3598287 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 41.0 | 3.11e-01 | 79.8% | 94.9% |
| 4666966 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 45.0 | 4.14e-01 | 93.3% | 88.9% |
| 3913238 | 2007.2.3.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Myotub-related | 0.53 | 45.0 | 3.01e-01 | 94.2% | 59.8% |
| 5000155 | 2007.1.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like | 0.53 | 42.0 | 3.17e-01 | 84.6% | 51.9% |
| 3229980 | 2007.1.9.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) | 0.53 | 41.0 | 3.58e-01 | 80.8% | 90.3% |
| None | — | 0.53 | 43.0 | 3.38e-01 | 87.5% | 80.9% | |
| 3546839 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 41.0 | 3.10e-01 | 85.6% | 88.9% |
| 4942922 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 42.0 | 3.30e-01 | 87.5% | 75.3% |
| 3666633 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.52 | 41.0 | 3.81e-01 | 86.5% | 90.4% |
| 4480622 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.52 | 44.0 | 4.16e-01 | 94.2% | 88.4% |
| 3319184 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.52 | 46.0 | 3.94e-01 | 100.0% | 84.0% |
| 4276893 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.52 | 43.0 | 3.22e-01 | 92.3% | 93.8% |
| 3177457 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.51 | 39.0 | 3.24e-01 | 80.8% | 49.7% |
| 2988294 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.51 | 43.0 | 3.48e-01 | 94.2% | 78.5% |
| 3653986 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.51 | 45.0 | 3.90e-01 | 100.0% | 81.8% |
| 4621615 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.51 | 42.0 | 3.10e-01 | 91.3% | 93.8% |
| 5029315 | 2484.1.1.30 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N | 0.50 | 41.0 | 3.58e-01 | 88.5% | 96.2% |
| 3779057 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.50 | 36.0 | 3.44e-01 | 76.9% | 94.6% |
| 3615311 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 38.0 | 2.77e-01 | 78.8% | 86.3% |