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IMGVR_UViG_3300009768_000055-3300009768-Ga0116193_100296112
Arc-VirIMGVR_UViG_3300009768_000055-3300009768-Ga0116193_100296112
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-126
Domain cluster:
rep: IMGVR_UViG_3300031853_000142-3300031853-Ga0326514_1000024817__D42-135
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1utaA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.70 | 37.0 | 4.27e-01 | 95.3% | 70.1% |
| 4ritA01 | 3.90.1150.170 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.68 | 39.0 | 3.02e-01 | 96.2% | 26.2% |
| 3udcA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 42.0 | 4.58e-01 | 99.1% | 83.0% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 37.0 | 3.87e-01 | 99.1% | 62.9% |
| 1ab8A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.57 | 39.0 | 3.29e-01 | 98.1% | 41.8% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.55 | 34.0 | 4.13e-01 | 100.0% | 100.0% |
| 6liuC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 34.0 | 3.34e-01 | 96.2% | 56.0% |
| 7yj5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 28.0 | 2.47e-01 | 100.0% | 32.9% |
| 1hufA00 | 3.30.1570.10 | Alpha Beta › 2-Layer Sandwich › YopH tyrosine phosphatase N-terminal domain › Protein-tyrosine phosphatase, YopH, N-terminal domain | 0.51 | 29.0 | 2.82e-01 | 94.3% | 46.3% |
| 2p84A01 | 2.60.430.10 | Mainly Beta › Sandwich › YopX-like fold › YopX-like domain | 0.51 | 30.0 | 3.65e-01 | 96.2% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3311237 | 304.52.1.1 ↗ | a+b two layers › Alpha-beta plaits › YbeD/HP0495-like › YbeD/HP0495-like › DUF493 | 0.64 | 39.0 | 4.16e-01 | 97.2% | 71.1% |
| 3710883 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 32.0 | 2.59e-01 | 94.3% | 28.2% |
| 1833953 | 3702.1.1.2 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › PBP_dimer_2 | 0.53 | 31.0 | 3.75e-01 | 93.4% | 100.0% |
| 3595821 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 33.0 | 3.59e-01 | 99.1% | 74.4% |
| 1177436 | 847.1.1.0 ↗ | a+b complex topology › YopH tyrosine phosphatase N-terminal domain › YopH tyrosine phosphatase N-terminal domain › YopH tyrosine phosphatase N-terminal domain | 0.51 | 29.0 | 2.74e-01 | 93.4% | 44.2% |