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IMGVR_UViG_3300009771_000005-3300009771-Ga0116155_1000038555

Arc-Vir

IMGVR_UViG_3300009771_000005-3300009771-Ga0116155_1000038555

Quality

66.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-49
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.76 65.0 4.57e-01 100.0% 33.8%
3bt7A02 2.40.50.1070 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 56.0 4.05e-01 100.0% 28.3%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.71 55.0 4.77e-01 100.0% 53.8%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 58.0 4.30e-01 100.0% 34.6%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.69 56.0 4.22e-01 100.0% 34.3%
4mh4A02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.69 57.0 4.69e-01 100.0% 56.4%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.68 57.0 4.15e-01 100.0% 33.6%
3en9A03 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 54.0 4.81e-01 97.8% 63.0%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.67 53.0 4.13e-01 100.0% 38.4%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 52.0 3.23e-01 84.8% 69.4%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 52.0 4.16e-01 93.5% 41.8%
3maeA00 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.67 50.0 3.18e-01 82.6% 72.6%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 51.0 4.39e-01 100.0% 51.8%
2b9dA01 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 41.0 4.42e-01 78.3% 76.9%
3oh8A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 51.0 3.74e-01 100.0% 31.4%
1d5cA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 49.0 3.46e-01 93.5% 44.4%
1q9jB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.61 43.0 3.03e-01 100.0% 20.4%
2vpzB01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 46.0 3.46e-01 91.3% 39.3%
3bxpB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 50.0 3.19e-01 97.8% 32.8%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.59 44.0 3.45e-01 97.8% 38.9%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.59 47.0 3.77e-01 100.0% 73.4%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.58 52.0 3.54e-01 97.8% 67.5%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 48.0 3.26e-01 95.7% 46.7%
1lshB00 2.20.90.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain 0.58 49.0 3.42e-01 100.0% 50.6%
5t0oA03 3.30.70.1320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like 0.58 47.0 3.86e-01 100.0% 86.1%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 3.80e-01 100.0% 44.9%
2z5bB01 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.58 45.0 3.33e-01 84.8% 82.4%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 47.0 3.45e-01 100.0% 31.5%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 48.0 4.04e-01 100.0% 51.7%
4my0C01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 50.0 3.57e-01 100.0% 64.3%
1yu9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 44.0 3.10e-01 91.3% 25.1%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 3.53e-01 78.3% 71.8%
1p1lA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 43.0 3.34e-01 84.8% 100.0%
2hv2A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 39.0 3.33e-01 82.6% 81.1%
3regA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 46.0 3.23e-01 100.0% 49.1%
4i1sB00 4.10.80.340 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › 0.55 38.0 3.71e-01 73.9% 96.2%
3aonA00 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 43.0 3.07e-01 100.0% 35.6%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 45.0 3.39e-01 93.5% 38.7%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.54 44.0 3.59e-01 93.5% 60.0%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.54 37.0 3.56e-01 91.3% 61.4%
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.00e-01 93.5% 23.2%
3o2iA00 3.30.70.2710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 37.0 2.91e-01 71.7% 83.9%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 48.0 2.83e-01 100.0% 64.0%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.53 42.0 2.97e-01 93.5% 45.3%
5mgyA00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.52 45.0 2.74e-01 100.0% 67.9%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 36.0 3.35e-01 91.3% 53.8%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.52 37.0 3.26e-01 71.7% 83.1%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.26e-01 95.7% 80.9%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 43.0 2.72e-01 97.8% 46.0%
1iicA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 38.0 2.85e-01 100.0% 59.0%
4hqnA01 2.20.100.10 Mainly Beta › Single Sheet › TSP-1 type 1 repeat › Thrombospondin type-1 (TSP1) repeat 0.51 35.0 3.24e-01 91.3% 52.3%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.51 44.0 3.14e-01 95.7% 68.7%
2wxfA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 39.0 2.87e-01 97.8% 31.9%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.50 42.0 2.74e-01 100.0% 20.6%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4998031 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.76 56.0 3.68e-01 78.3% 23.7%
3480610 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.74 51.0 4.40e-01 71.7% 95.7%
4987228 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.73 60.0 4.05e-01 100.0% 24.9%
4018584 6155.1.1.15 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF846 0.72 50.0 3.49e-01 73.9% 32.7%
4886985 7523.1.1.16 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP 0.70 52.0 3.82e-01 80.4% 54.4%
4856500 135.1.1.1 alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha 0.70 48.0 5.14e-01 82.6% 100.0%
4954522 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.69 56.0 4.68e-01 100.0% 51.1%
4444422 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.69 58.0 4.18e-01 91.3% 41.5%
3519117 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.68 58.0 3.90e-01 100.0% 74.7%
3811535 331.3.1.28 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 0.66 57.0 4.21e-01 100.0% 88.0%
3265334 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.66 55.0 4.26e-01 97.8% 43.6%
1234289 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.65 53.0 3.84e-01 100.0% 32.9%
3580898 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 50.0 3.57e-01 93.5% 30.6%
4975329 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 47.0 3.27e-01 84.8% 24.0%
4985406 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.63 52.0 4.49e-01 100.0% 57.0%
4982249 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.63 52.0 4.13e-01 100.0% 45.3%
4179803 4964.1.1.2 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.62 45.0 2.99e-01 80.4% 55.5%
3576647 327.5.1.0 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.62 47.0 4.17e-01 84.8% 98.6%
3267835 284.1.3.1 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 0.62 49.0 3.89e-01 93.5% 97.1%
5047179 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.62 51.0 3.23e-01 100.0% 40.1%
3850966 3346.1.1.1 a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › UfSP2_N 0.62 53.0 3.32e-01 97.8% 94.4%
5029930 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 4.02e-01 93.5% 84.0%
4027196 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 51.0 4.09e-01 100.0% 78.0%
5048881 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.61 52.0 3.63e-01 100.0% 77.4%
3994884 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.61 47.0 2.87e-01 84.8% 52.9%
5023262 327.11.2.82 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27275 0.61 51.0 4.45e-01 100.0% 63.1%
3889987 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 46.0 3.35e-01 100.0% 26.1%
3266052 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.60 47.0 3.34e-01 87.0% 50.3%
4949473 5086.1.1.230 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ATP-synt_D 0.60 51.0 3.38e-01 100.0% 29.0%
3896215 2004.1.1.118 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.59 48.0 3.33e-01 100.0% 78.4%
4156749 3234.1.1.2 a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N 0.59 44.0 2.76e-01 84.8% 16.8%
5036327 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.58 46.0 4.22e-01 100.0% 66.2%
5055279 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.58 51.0 3.32e-01 100.0% 71.7%
3270940 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.58 48.0 3.27e-01 100.0% 72.4%
5037750 3926.1.1.1 alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.57 46.0 3.18e-01 100.0% 32.8%
4931277 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.57 46.0 3.20e-01 89.1% 29.7%
5056319 177.1.1.0 alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease 0.57 49.0 3.31e-01 100.0% 98.4%
3666034 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.56 44.0 3.59e-01 100.0% 63.6%
4183868 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.56 50.0 4.19e-01 100.0% 60.8%
3579172 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.56 44.0 2.96e-01 100.0% 20.9%
4505972 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 42.0 2.58e-01 100.0% 12.2%
3480623 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.55 45.0 3.80e-01 91.3% 92.4%
4054500 601.7.1.40 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas13a_C 0.55 48.0 2.69e-01 100.0% 35.4%
4538961 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.55 42.0 3.78e-01 93.5% 58.7%
3769782 263.1.1.4 a+b three layers › SRF-like › SRF-like › SRF-like › PRAS_NT 0.54 40.0 3.68e-01 97.8% 58.8%
3251044 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.54 44.0 3.16e-01 97.8% 39.0%
4001707 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.54 48.0 3.87e-01 97.8% 56.5%
3925690 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.54 49.0 4.05e-01 97.8% 64.0%
5050683 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 46.0 3.40e-01 97.8% 56.8%
5039979 604.2.1.1 alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succ_DH_flav_C 0.53 47.0 3.34e-01 100.0% 57.8%
3857887 5094.1.1.11 a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › Fy-3 0.52 39.0 3.55e-01 100.0% 57.3%
3236416 5001.1.1.41 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.52 42.0 2.58e-01 100.0% 68.6%
3679515 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.52 43.0 4.37e-01 100.0% 93.3%
1665018 298.1.1.6 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › G6PD_C 0.52 44.0 2.72e-01 97.8% 42.2%
3326759 284.1.3.1 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 0.52 43.0 3.69e-01 95.7% 57.3%
3684317 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.52 46.0 2.52e-01 100.0% 6.7%
3705541 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.39e-01 100.0% 88.0%
3325708 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.51 45.0 2.78e-01 100.0% 16.0%
5029914 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.51 42.0 4.01e-01 91.3% 78.2%
1153578 75.1.1.1 beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Pro_isomerase 0.51 37.0 3.35e-01 82.6% 67.1%
3367891 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.51 45.0 2.72e-01 100.0% 14.4%
5031862 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.51 44.0 3.08e-01 100.0% 34.7%
3619274 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.50 47.0 2.97e-01 100.0% 51.6%
3058947 221.1.1.8 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd 0.50 41.0 3.05e-01 93.5% 37.0%
D2 high residues 179-237
PDB
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t6jA03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.79 72.0 5.89e-01 100.0% 92.2%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 4.83e-01 78.0% 57.1%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.71 57.0 4.50e-01 88.1% 44.6%
4r42A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.71 53.0 3.66e-01 89.8% 25.1%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.50e-01 83.1% 82.8%
2m7bA00 1.10.10.1920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 54.0 5.04e-01 93.2% 94.8%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 46.0 4.83e-01 74.6% 98.0%
1nklA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.65 47.0 4.33e-01 78.0% 73.1%
3k7dA03 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.64 56.0 4.26e-01 94.9% 47.0%
1te2A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 49.0 4.64e-01 84.7% 84.7%
1cqxA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 56.0 4.16e-01 100.0% 82.7%
1wkbA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 52.0 3.16e-01 98.3% 63.0%
1abvA00 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.62 45.0 3.86e-01 81.4% 96.2%
3stoA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.60 52.0 3.50e-01 96.6% 40.6%
2wy4A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.60 50.0 3.91e-01 96.6% 89.9%
3l5kA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 45.0 4.34e-01 83.1% 85.3%
4z4qA04 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.60 49.0 4.24e-01 88.1% 97.8%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 48.0 4.42e-01 96.6% 67.9%
2yhsA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.59 46.0 3.91e-01 84.7% 53.6%
4nqwB00 1.10.10.1320 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Anti-sigma factor, zinc-finger domain 0.58 49.0 4.60e-01 93.2% 78.1%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 42.0 3.42e-01 79.7% 96.6%
1wbeA01 1.10.3520.10 Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein 0.57 47.0 3.49e-01 100.0% 93.5%
2qsrA01 3.90.1150.50 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain 0.57 48.0 3.64e-01 98.3% 47.1%
2v40A02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.57 44.0 4.00e-01 89.8% 94.3%
1v5dA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.56 48.0 2.95e-01 94.9% 52.7%
3iu0A00 3.90.1360.10 Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase 0.56 42.0 2.72e-01 89.8% 15.8%
3pvuA02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.56 38.0 3.52e-01 72.9% 92.5%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 41.0 4.08e-01 79.7% 85.5%
2af0A02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.55 40.0 3.64e-01 78.0% 96.2%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.54 37.0 3.27e-01 74.6% 64.6%
5my3A00 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.54 42.0 2.97e-01 86.4% 51.5%
6b8hO01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.54 35.0 3.03e-01 71.2% 38.4%
2yjgA01 3.90.226.30 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › LarA, C-terminal domain 0.54 39.0 2.87e-01 81.4% 36.2%
2qgyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 45.0 3.43e-01 93.2% 64.2%
3cqcB01 1.20.58.1380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 42.0 3.81e-01 100.0% 94.4%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3227146 101.1.1.82 alpha arrays › HTH › HTH › Three-helical HTH › CDH1_2_SANT_HL1 0.83 76.0 6.36e-01 100.0% 62.1%
3992442 592.7.1.1 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.80 60.0 5.27e-01 79.7% 56.5%
3220510 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.79 57.0 6.14e-01 76.3% 90.0%
3730705 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 54.0 5.69e-01 72.9% 94.0%
5044421 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.75 51.0 4.62e-01 71.2% 61.3%
3711217 101.7.1.0 alpha arrays › HTH › DEK-C › DEK-C 0.74 52.0 5.08e-01 74.6% 86.2%
3191588 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.73 59.0 4.02e-01 89.8% 33.0%
3899102 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.73 63.0 3.73e-01 100.0% 39.0%
4947399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 54.0 4.62e-01 79.7% 78.9%
4945985 2.21.1.0 beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.73 52.0 3.78e-01 76.3% 29.4%
3234027 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.72 54.0 5.43e-01 81.4% 83.3%
5030693 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 54.0 4.54e-01 83.1% 62.9%
3877842 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.72 62.0 3.64e-01 100.0% 38.0%
3805763 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.71 62.0 4.68e-01 100.0% 76.7%
4520559 592.2.1.1 alpha arrays › PWI domain-like › YugE-like › YugE-like › DUF1871 0.70 56.0 5.03e-01 89.8% 83.5%
4966184 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.70 52.0 4.55e-01 83.1% 88.4%
3584520 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 64.0 5.07e-01 98.3% 97.3%
3925690 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.69 57.0 5.33e-01 94.9% 93.3%
4927487 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.69 59.0 5.46e-01 94.9% 82.7%
4276274 198.2.1.1 alpha arrays › Saposin-like › Bacteriocin AS-48-related › Bacteriocin AS-48-related › Bacteriocin_IId 0.68 48.0 4.66e-01 81.4% 67.7%
3952621 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.67 53.0 5.06e-01 88.1% 88.4%
4436102 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 49.0 4.91e-01 81.4% 85.0%
3708809 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 48.0 4.70e-01 79.7% 89.2%
3714293 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.66 48.0 4.75e-01 81.4% 90.8%
5012836 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.66 58.0 3.78e-01 100.0% 79.3%
3436081 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.66 50.0 4.67e-01 83.1% 78.1%
5033981 3705.1.1.0 alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) 0.65 48.0 4.46e-01 83.1% 73.8%
3789554 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.64 53.0 4.61e-01 91.5% 74.4%
3238601 371.1.1.0 few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.63 52.0 3.41e-01 100.0% 27.9%
4972648 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.63 55.0 3.56e-01 100.0% 31.9%
4961862 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 3.56e-01 74.6% 76.1%
3215219 371.1.1.0 few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.61 49.0 4.06e-01 89.8% 83.3%
4946543 2004.1.3.3 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR_N 0.60 45.0 3.23e-01 84.7% 29.2%
5026098 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.57 47.0 3.25e-01 89.8% 85.0%
3173411 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.57 46.0 3.20e-01 96.6% 44.3%
3522359 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.55 44.0 4.63e-01 86.4% 94.5%
3300391 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 37.0 2.71e-01 71.2% 25.6%
D3 high residues 306-351
PDB
Domain cluster: representative
CATH (85)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 76.0 7.37e-01 100.0% 94.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 76.0 7.05e-01 100.0% 86.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 75.0 6.74e-01 100.0% 79.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 74.0 6.34e-01 100.0% 63.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 74.0 7.15e-01 100.0% 88.2%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 73.0 7.14e-01 100.0% 90.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 72.0 6.28e-01 100.0% 80.0%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 72.0 6.50e-01 100.0% 89.1%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 72.0 6.73e-01 100.0% 89.5%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 71.0 6.25e-01 100.0% 79.4%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 71.0 5.94e-01 100.0% 69.6%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 71.0 5.91e-01 100.0% 67.5%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 70.0 6.63e-01 100.0% 98.2%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 72.0 7.05e-01 100.0% 98.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 72.0 6.57e-01 100.0% 81.4%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 68.0 4.45e-01 100.0% 27.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 67.0 6.71e-01 95.7% 100.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 68.0 6.34e-01 100.0% 93.2%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.42e-01 100.0% 79.7%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 67.0 6.14e-01 100.0% 92.1%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.78 65.0 4.99e-01 100.0% 42.2%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 67.0 6.19e-01 100.0% 95.0%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 66.0 5.50e-01 100.0% 64.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 66.0 6.58e-01 100.0% 91.7%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 5.80e-01 100.0% 93.0%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 66.0 6.21e-01 100.0% 94.7%
2creA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 65.0 5.76e-01 100.0% 81.7%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 66.0 6.09e-01 100.0% 90.0%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 68.0 5.97e-01 100.0% 69.1%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 65.0 5.93e-01 100.0% 87.5%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 65.0 5.93e-01 100.0% 88.9%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 64.0 5.82e-01 100.0% 96.9%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 64.0 6.09e-01 100.0% 93.0%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.76 68.0 5.80e-01 100.0% 79.2%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 67.0 6.46e-01 100.0% 86.5%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 63.0 5.94e-01 100.0% 91.5%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 66.0 5.62e-01 100.0% 61.6%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.75 66.0 5.19e-01 100.0% 49.0%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.75 65.0 5.57e-01 100.0% 84.2%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 64.0 5.73e-01 100.0% 86.6%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.75 65.0 6.01e-01 100.0% 76.3%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 66.0 5.96e-01 100.0% 73.0%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 62.0 5.93e-01 100.0% 94.7%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 65.0 5.85e-01 100.0% 72.3%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.74 64.0 5.51e-01 100.0% 89.2%
1vwxY00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 4.61e-01 100.0% 40.3%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 52.0 3.95e-01 76.1% 75.7%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 61.0 5.84e-01 100.0% 96.5%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 61.0 5.33e-01 100.0% 82.7%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 5.70e-01 100.0% 70.3%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 60.0 5.26e-01 100.0% 71.1%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 62.0 5.59e-01 100.0% 81.5%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 6.07e-01 100.0% 96.2%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.72 62.0 5.15e-01 100.0% 78.6%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 58.0 5.40e-01 95.7% 100.0%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.70 54.0 4.12e-01 100.0% 35.4%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.37e-01 100.0% 91.9%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.70 58.0 5.04e-01 100.0% 81.6%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.69 60.0 5.77e-01 100.0% 85.2%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 5.71e-01 100.0% 91.8%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 5.36e-01 100.0% 76.7%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.67 57.0 5.31e-01 100.0% 81.7%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.67 57.0 5.54e-01 100.0% 98.0%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.66 56.0 5.07e-01 100.0% 72.7%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.02e-01 100.0% 75.8%
3frnA01 3.10.129.70 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.64 48.0 3.43e-01 82.6% 72.7%
1s4uX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 50.0 3.04e-01 93.5% 21.1%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.62 44.0 3.90e-01 78.3% 49.3%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 3.64e-01 89.1% 75.4%
2ywlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 49.0 3.41e-01 95.7% 62.2%
3lovA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 47.0 3.37e-01 91.3% 49.3%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 45.0 3.50e-01 89.1% 75.8%
5j60A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 46.0 3.18e-01 95.7% 52.3%
3t37A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 51.0 3.25e-01 100.0% 56.9%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 46.0 4.43e-01 93.5% 83.6%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.56 41.0 3.70e-01 82.6% 65.7%
4omfB02 3.10.450.750 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 4.10e-01 84.8% 89.4%
4w1vA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 48.0 3.30e-01 97.8% 62.7%
2bwnB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 46.0 3.22e-01 97.8% 63.5%
4udqA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 48.0 2.87e-01 100.0% 60.0%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 45.0 2.79e-01 100.0% 18.2%
2hzmA02 2.20.140.20 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › 0.53 43.0 3.68e-01 100.0% 88.2%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.53 41.0 3.15e-01 97.8% 61.6%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 39.0 3.21e-01 93.5% 76.8%
3i7dA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 42.0 2.91e-01 95.7% 56.7%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4534931 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.89 75.0 6.28e-01 100.0% 56.0%
3821919 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.89 77.0 6.96e-01 100.0% 71.7%
4585317 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.88 74.0 6.95e-01 100.0% 76.4%
3675341 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.88 74.0 6.97e-01 100.0% 76.4%
3436022 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.88 74.0 6.94e-01 100.0% 76.4%
4583465 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.87 73.0 7.12e-01 100.0% 84.0%
4336500 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.87 73.0 6.86e-01 100.0% 76.4%
4169657 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.87 73.0 7.09e-01 100.0% 84.0%
4668201 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.86 72.0 6.99e-01 100.0% 84.0%
4385345 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.86 72.0 7.04e-01 100.0% 84.0%
4058919 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.85 72.0 6.99e-01 100.0% 84.0%
3838867 4.1.1.82 beta barrels › SH3 › SH3 › SH3 › N_NLPC_P60,SH3_6 0.85 75.0 5.29e-01 100.0% 52.1%
3519125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 75.0 7.31e-01 100.0% 90.0%
4170351 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.85 71.0 5.97e-01 100.0% 56.0%
4432330 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.84 71.0 6.91e-01 100.0% 84.0%
4629022 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.84 77.0 6.59e-01 100.0% 65.7%
3721794 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 76.0 6.94e-01 100.0% 76.7%
3782293 4.1.1.170 beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.84 71.0 6.62e-01 100.0% 76.4%
3198731 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.83 77.0 5.38e-01 100.0% 36.9%
3490689 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 72.0 6.32e-01 100.0% 78.6%
3476478 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 73.0 5.69e-01 100.0% 47.4%
3305577 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.82 70.0 6.57e-01 100.0% 78.2%
4013671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 71.0 6.77e-01 100.0% 100.0%
1386398 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 70.0 6.01e-01 100.0% 73.3%
3399557 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 71.0 6.16e-01 100.0% 80.0%
3599257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 69.0 6.25e-01 100.0% 84.6%
3788449 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 69.0 6.03e-01 100.0% 78.6%
3498280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 70.0 4.97e-01 100.0% 34.6%
3483375 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 67.0 5.81e-01 100.0% 84.0%
3512420 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 68.0 5.60e-01 100.0% 62.4%
3523046 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 68.0 5.59e-01 100.0% 62.4%
3763497 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 68.0 5.83e-01 100.0% 84.0%
3801719 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 68.0 5.96e-01 100.0% 78.6%
3485667 4.1.1.99 beta barrels › SH3 › SH3 › SH3 › SH3_10 0.79 68.0 5.84e-01 100.0% 69.3%
3170922 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.78 66.0 5.88e-01 97.8% 79.4%
3778124 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 68.0 6.11e-01 100.0% 81.5%
3910433 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 71.0 6.28e-01 100.0% 73.8%
3616243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 70.0 6.56e-01 100.0% 81.8%
3170251 4.1.1.170 beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.78 70.0 4.87e-01 100.0% 32.9%
3517728 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.77 70.0 6.04e-01 100.0% 65.7%
3763060 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.77 66.0 5.81e-01 100.0% 88.6%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 68.0 6.66e-01 100.0% 90.0%
3620094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 68.0 6.41e-01 100.0% 81.8%
3229601 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.76 68.0 6.18e-01 100.0% 75.0%
3398093 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.76 69.0 6.30e-01 100.0% 76.7%
3470815 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 65.0 5.77e-01 100.0% 85.7%
3539094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.47e-01 100.0% 78.8%
3979986 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.76 65.0 5.63e-01 100.0% 88.0%
3926701 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.76 65.0 5.80e-01 100.0% 80.9%
3547084 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 68.0 5.40e-01 100.0% 51.1%
4508412 4.1.1.437 beta barrels › SH3 › SH3 › SH3 › PF29224 0.76 65.0 6.01e-01 100.0% 85.0%
3765289 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 69.0 5.42e-01 100.0% 51.1%
4020558 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.82e-01 100.0% 84.6%
3622911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 64.0 5.67e-01 100.0% 82.9%
3830187 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 67.0 6.36e-01 100.0% 83.6%
3710823 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 64.0 6.22e-01 100.0% 86.0%
3881119 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 67.0 5.57e-01 100.0% 57.5%
5042313 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.75 64.0 5.54e-01 100.0% 80.0%
3692073 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 63.0 5.63e-01 100.0% 78.6%
4584943 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 64.0 5.67e-01 100.0% 70.0%
3330943 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.75 67.0 6.32e-01 100.0% 83.6%
3294392 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.75 67.0 5.43e-01 100.0% 54.1%
3883895 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 63.0 5.00e-01 100.0% 63.0%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 66.0 6.24e-01 100.0% 83.3%
3996278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 67.0 4.89e-01 100.0% 57.5%
4505797 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 64.0 5.75e-01 100.0% 73.8%
3927363 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 64.0 6.31e-01 100.0% 90.0%
3883159 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 66.0 5.25e-01 100.0% 51.1%
3840679 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 65.0 5.14e-01 100.0% 48.4%
3920666 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 66.0 5.23e-01 100.0% 51.1%
3925408 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 66.0 6.42e-01 100.0% 92.0%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 66.0 6.00e-01 100.0% 76.7%
194032 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 61.0 5.26e-01 100.0% 68.8%
3795223 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.28e-01 100.0% 54.1%
4208040 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 62.0 5.40e-01 100.0% 69.9%
4185009 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 62.0 5.58e-01 100.0% 75.4%
4957350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 60.0 5.43e-01 100.0% 67.7%
4104821 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 62.0 5.34e-01 100.0% 65.3%
4664510 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 59.0 5.33e-01 95.7% 80.0%
4269844 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 60.0 5.32e-01 100.0% 77.1%
4342110 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 60.0 5.24e-01 100.0% 67.1%
4446467 4.1.1.278 beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.70 59.0 5.36e-01 100.0% 89.2%
4084850 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 59.0 5.35e-01 100.0% 75.4%
5033892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.38e-01 100.0% 83.1%
3437523 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.70 61.0 5.31e-01 100.0% 74.3%
4124780 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 58.0 5.11e-01 100.0% 67.1%
4226934 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 58.0 5.29e-01 100.0% 75.4%
4212091 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 57.0 5.22e-01 100.0% 75.4%
4959077 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.18e-01 100.0% 96.9%
4264671 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 58.0 4.90e-01 100.0% 62.5%
4660084 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 55.0 4.99e-01 100.0% 73.9%
4940673 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.31e-01 100.0% 83.3%
4476045 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 55.0 4.93e-01 100.0% 74.3%
4527355 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 54.0 4.92e-01 100.0% 75.4%
4974211 4.1.1.485 beta barrels › SH3 › SH3 › SH3 › DUF6897 0.66 56.0 5.22e-01 100.0% 78.3%
4927532 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.65 54.0 4.07e-01 100.0% 45.6%
4302032 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 52.0 4.84e-01 100.0% 75.4%
4429329 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 53.0 4.86e-01 100.0% 78.5%
4299932 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 52.0 4.77e-01 100.0% 78.5%
3303112 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.57 45.0 3.49e-01 91.3% 50.9%
D4 medium residues 55-112
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4u7bA01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 52.0 5.43e-01 77.6% 94.1%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 4.54e-01 81.0% 65.6%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 4.54e-01 82.8% 62.4%
1nklA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.66 50.0 4.67e-01 86.2% 82.1%
3r7tA02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.66 49.0 4.30e-01 82.8% 89.0%
3iu0A00 3.90.1360.10 Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase 0.65 52.0 3.21e-01 89.7% 67.5%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 45.0 4.76e-01 77.6% 96.0%
3oz6B02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.63 50.0 3.40e-01 91.4% 79.0%
2ly1A03 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.62 46.0 4.17e-01 81.0% 65.4%
5xbfA02 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.59 44.0 3.85e-01 84.5% 62.6%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.59 42.0 4.14e-01 75.9% 96.8%
2be4A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 42.0 3.88e-01 81.0% 79.0%
3p01A01 6.10.140.590 Special › Helix non-globular › Helix Hairpins › 0.58 43.0 3.93e-01 82.8% 73.5%
2qsrA01 3.90.1150.50 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain 0.56 44.0 3.36e-01 89.7% 43.2%
2x6hA01 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.56 43.0 3.04e-01 86.2% 35.5%
1mhyG02 1.20.1280.30 Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 0.55 39.0 3.71e-01 77.6% 75.3%
1jr8A00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.54 39.0 3.35e-01 81.0% 93.3%
2yjgA01 3.90.226.30 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › LarA, C-terminal domain 0.54 45.0 3.28e-01 100.0% 72.4%
4r42A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 36.0 2.65e-01 72.4% 81.3%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3702727 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 62.0 5.11e-01 79.3% 52.0%
3468254 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.75 60.0 5.60e-01 86.2% 87.1%
3220510 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.75 57.0 6.04e-01 82.8% 100.0%
3300095 592.1.1.1 alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI 0.74 58.0 5.63e-01 84.5% 90.8%
3342850 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.74 60.0 5.52e-01 89.7% 70.7%
2084570 592.7.1.1 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.74 59.0 5.12e-01 89.7% 58.7%
3992442 592.7.1.1 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.73 58.0 5.18e-01 89.7% 68.2%
3730705 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 56.0 5.87e-01 84.5% 100.0%
3930259 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.72 56.0 5.22e-01 87.9% 72.0%
3923890 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.72 57.0 6.02e-01 86.2% 100.0%
4276274 198.2.1.1 alpha arrays › Saposin-like › Bacteriocin AS-48-related › Bacteriocin AS-48-related › Bacteriocin_IId 0.69 54.0 5.27e-01 86.2% 83.1%
5033981 3705.1.1.0 alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) 0.68 50.0 4.62e-01 82.8% 76.2%
3857352 592.1.1.8 alpha arrays › PWI domain-like › PWI domain › PWI domain › TRI4_N 0.67 50.0 4.65e-01 82.8% 88.0%
3932988 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 50.0 5.09e-01 86.2% 85.5%
3565196 198.1.1.13 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, PF31278 0.66 49.0 4.46e-01 84.5% 77.6%
4436102 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 50.0 4.99e-01 87.9% 95.0%
5044421 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.63 48.0 4.42e-01 86.2% 78.8%
3588367 162.1.1.0 alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD 0.63 50.0 4.00e-01 93.1% 88.5%
3406422 592.2.1.9 alpha arrays › PWI domain-like › YugE-like › YugE-like › PP1_inhibitor 0.62 47.0 4.29e-01 86.2% 70.2%
3844496 592.1.1.12 alpha arrays › PWI domain-like › PWI domain › PWI domain › PP1_inhibitor 0.62 47.0 4.34e-01 86.2% 77.5%
4105244 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.61 47.0 4.76e-01 89.7% 98.3%
3896159 110.1.1.2 alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD 0.60 42.0 3.54e-01 74.1% 51.0%
3807462 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.59 39.0 3.04e-01 79.3% 28.3%
5048562 2500.1.1.4 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 0.58 49.0 3.02e-01 100.0% 33.2%
3479834 110.1.1.0 alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.57 40.0 3.40e-01 74.1% 51.0%
3882948 110.1.1.2 alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD 0.55 37.0 3.35e-01 70.7% 56.5%
3669079 109.4.1.1279 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.55 39.0 2.32e-01 79.3% 14.6%
3344232 109.4.1.1274 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.55 40.0 2.33e-01 79.3% 19.5%
3299763 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.53 39.0 2.52e-01 84.5% 14.8%
3812661 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 39.0 3.44e-01 86.2% 50.5%