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IMGVR_UViG_3300009773_000291-3300009773-Ga0123333_100105592
Arc-VirIMGVR_UViG_3300009773_000291-3300009773-Ga0123333_100105592
Identity
- Kingdom:
- archaea
Quality
68.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-53
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yfbA00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.85 | 68.0 | 6.48e-01 | 100.0% | 75.0% |
| 1ub4C00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.81 | 68.0 | 5.73e-01 | 100.0% | 56.0% |
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.81 | 67.0 | 6.76e-01 | 100.0% | 95.5% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.68 | 55.0 | 5.19e-01 | 100.0% | 75.4% |
| 1vwxP00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.61 | 47.0 | 3.39e-01 | 95.3% | 68.0% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.61 | 49.0 | 4.16e-01 | 100.0% | 86.9% |
| 6qdws00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.61 | 48.0 | 3.77e-01 | 97.7% | 67.0% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.61 | 41.0 | 3.62e-01 | 74.4% | 45.1% |
| 2mh9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 2.97e-01 | 72.1% | 26.0% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 42.0 | 2.56e-01 | 79.1% | 15.1% |
| 1fs7A01 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.57 | 42.0 | 2.58e-01 | 86.0% | 41.3% |
| 5oomJ01 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.56 | 44.0 | 4.05e-01 | 100.0% | 81.8% |
| 2i5tA00 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.56 | 46.0 | 3.16e-01 | 100.0% | 66.9% |
| 1vwxg01 | 6.20.370.70 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.55 | 39.0 | 4.08e-01 | 100.0% | 91.9% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.54 | 39.0 | 3.65e-01 | 93.0% | 86.8% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.53 | 43.0 | 3.02e-01 | 100.0% | 40.0% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 35.0 | 2.60e-01 | 79.1% | 21.6% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.52 | 36.0 | 3.38e-01 | 100.0% | 55.2% |
| 4gs5A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 39.0 | 2.61e-01 | 97.7% | 48.4% |
| 3e0jA01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.51 | 39.0 | 2.48e-01 | 97.7% | 29.8% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 34.0 | 2.71e-01 | 72.1% | 28.3% |
| 2qa4I01 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.50 | 40.0 | 3.88e-01 | 100.0% | 83.6% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947865 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.95 | 89.0 | 8.37e-01 | 100.0% | 86.0% |
| 5010299 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.95 | 88.0 | 8.33e-01 | 100.0% | 88.0% |
| 5027484 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.92 | 82.0 | 8.13e-01 | 100.0% | 93.3% |
| 4927110 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.92 | 84.0 | 8.28e-01 | 100.0% | 95.6% |
| 4947224 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.91 | 82.0 | 7.78e-01 | 100.0% | 88.0% |
| 4962305 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.90 | 81.0 | 7.73e-01 | 100.0% | 88.0% |
| 5001623 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.90 | 81.0 | 7.69e-01 | 100.0% | 86.0% |
| 4085449 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.89 | 78.0 | 6.42e-01 | 100.0% | 56.0% |
| 5070516 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.89 | 73.0 | 6.54e-01 | 100.0% | 65.0% |
| 5031154 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.89 | 78.0 | 7.00e-01 | 100.0% | 71.7% |
| 4939022 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.89 | 79.0 | 7.54e-01 | 100.0% | 90.0% |
| 5073296 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.87 | 77.0 | 7.35e-01 | 100.0% | 90.0% |
| 4942905 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.87 | 78.0 | 7.71e-01 | 100.0% | 97.8% |
| 5076168 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.86 | 70.0 | 5.58e-01 | 100.0% | 45.9% |
| 5029523 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.86 | 73.0 | 7.11e-01 | 97.7% | 89.6% |
| 4930879 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.86 | 76.0 | 7.25e-01 | 100.0% | 86.0% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.86 | 77.0 | 7.05e-01 | 100.0% | 78.2% |
| 4967714 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.85 | 70.0 | 6.29e-01 | 100.0% | 66.7% |
| 4005331 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.85 | 72.0 | 6.93e-01 | 100.0% | 84.0% |
| 5031005 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.84 | 68.0 | 6.28e-01 | 100.0% | 70.9% |
| 5062781 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.84 | 74.0 | 7.29e-01 | 100.0% | 95.6% |
| 5032072 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.84 | 67.0 | 6.25e-01 | 100.0% | 70.9% |
| 4944882 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.83 | 72.0 | 6.96e-01 | 100.0% | 86.0% |
| 5065458 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.83 | 67.0 | 6.02e-01 | 100.0% | 65.0% |
| 5065651 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.83 | 67.0 | 6.20e-01 | 100.0% | 70.9% |
| 4966249 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.83 | 67.0 | 6.62e-01 | 100.0% | 86.7% |
| 3984485 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.83 | 69.0 | 5.72e-01 | 100.0% | 52.5% |
| 5069260 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.83 | 71.0 | 6.81e-01 | 100.0% | 86.0% |
| 3280820 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.82 | 67.0 | 6.22e-01 | 100.0% | 72.7% |
| 4639978 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.82 | 65.0 | 6.08e-01 | 100.0% | 70.9% |
| 5060420 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.82 | 70.0 | 6.96e-01 | 100.0% | 93.3% |
| 4992635 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.82 | 71.0 | 6.82e-01 | 100.0% | 87.8% |
| 5067548 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.82 | 70.0 | 6.92e-01 | 100.0% | 95.6% |
| 4993343 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.82 | 67.0 | 6.69e-01 | 97.7% | 91.1% |
| 5076644 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.81 | 66.0 | 5.98e-01 | 100.0% | 66.7% |
| 5050197 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.81 | 65.0 | 5.52e-01 | 100.0% | 53.3% |
| 4966971 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.81 | 65.0 | 6.09e-01 | 100.0% | 72.7% |
| 4994136 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.81 | 68.0 | 6.22e-01 | 97.7% | 72.4% |
| 4934807 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.81 | 64.0 | 5.39e-01 | 100.0% | 52.0% |
| 5050800 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.80 | 63.0 | 5.97e-01 | 100.0% | 72.7% |
| 4993411 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.80 | 66.0 | 6.02e-01 | 100.0% | 70.0% |
| 5032296 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.80 | 62.0 | 5.85e-01 | 100.0% | 70.9% |
| 4936825 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.80 | 59.0 | 5.65e-01 | 83.7% | 70.0% |
| 4992345 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.80 | 63.0 | 6.27e-01 | 100.0% | 86.7% |
| 4314606 | 1.1.3.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › PrlF_antitoxin | 0.79 | 65.0 | 6.26e-01 | 100.0% | 82.0% |
| 4954534 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.79 | 66.0 | 6.41e-01 | 100.0% | 92.0% |
| 5030546 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.78 | 62.0 | 5.87e-01 | 100.0% | 72.7% |
| 3590853 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.78 | 66.0 | 6.17e-01 | 100.0% | 78.2% |
| 4992409 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.78 | 64.0 | 6.40e-01 | 100.0% | 93.3% |
| 5032935 | 304.8.1.112 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MazE_antitoxin | 0.78 | 63.0 | 4.52e-01 | 100.0% | 30.4% |
| 4994020 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.78 | 63.0 | 5.81e-01 | 100.0% | 70.7% |
| 4535331 | 1.1.3.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › PrlF_antitoxin | 0.77 | 63.0 | 5.35e-01 | 100.0% | 54.7% |
| 4998594 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.77 | 61.0 | 6.05e-01 | 100.0% | 88.9% |
| 5057441 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.76 | 64.0 | 6.42e-01 | 100.0% | 95.6% |
| 5031362 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.75 | 58.0 | 5.35e-01 | 100.0% | 65.0% |
| 4941025 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.74 | 60.0 | 5.82e-01 | 100.0% | 83.7% |
| 5031988 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.72 | 56.0 | 5.49e-01 | 100.0% | 82.0% |
| 5024735 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.72 | 58.0 | 5.70e-01 | 100.0% | 86.0% |
| 5030511 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.70 | 54.0 | 5.41e-01 | 100.0% | 88.9% |
| 5031039 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.68 | 52.0 | 5.21e-01 | 100.0% | 88.9% |
| 4932924 | 375.1.1.321 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MazE_antitoxin | 0.68 | 52.0 | 5.36e-01 | 90.7% | 97.5% |
| 3467262 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.67 | 53.0 | 3.85e-01 | 97.7% | 30.3% |
| 3583595 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.64 | 43.0 | 3.90e-01 | 74.4% | 48.3% |
| 4937554 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.63 | 48.0 | 4.93e-01 | 88.4% | 94.9% |
| 3722969 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.61 | 41.0 | 2.84e-01 | 72.1% | 19.4% |
| 5028056 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.58 | 48.0 | 4.41e-01 | 100.0% | 73.3% |
| 3439924 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.58 | 44.0 | 4.36e-01 | 100.0% | 85.7% |
| 2555628 | 304.21.1.1 ↗ | a+b two layers › Alpha-beta plaits › Formylmethanofuran:tetrahydromethanopterin formyltransferase › Formylmethanofuran:tetrahydromethanopterin formyltransferase › FTR | 0.56 | 38.0 | 2.72e-01 | 72.1% | 21.9% |
| 5047447 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 39.0 | 2.98e-01 | 79.1% | 27.5% |
| 3936424 | 59.1.1.5 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Dcc1 | 0.55 | 43.0 | 3.45e-01 | 95.3% | 39.0% |
| 3957239 | 3781.1.1.1 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain › Ribosomal_L11_N | 0.54 | 40.0 | 3.99e-01 | 86.0% | 97.8% |
| 4542856 | 2003.1.5.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase | 0.53 | 41.0 | 2.45e-01 | 95.3% | 67.8% |
| 3287567 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.53 | 38.0 | 3.15e-01 | 83.7% | 83.3% |
| 3940272 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.52 | 41.0 | 2.47e-01 | 100.0% | 48.6% |
| 3512692 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.50 | 40.0 | 3.31e-01 | 93.0% | 65.9% |