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IMGVR_UViG_3300009780_000617-3300009780-Ga0116156_100100965
Arc-VirIMGVR_UViG_3300009780_000617-3300009780-Ga0116156_100100965
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-106
Domain cluster:
rep: IMGVR_UViG_3300021491_000005-3300021491-Ga0190332_10000154__D9-112
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.66 | 39.0 | 3.39e-01 | 90.1% | 38.6% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 44.0 | 3.85e-01 | 87.9% | 46.4% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.61 | 35.0 | 3.97e-01 | 87.9% | 79.4% |
| 1fx5B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 53.0 | 3.86e-01 | 100.0% | 61.5% |
| 4bhrA00 | 3.30.1300.70 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.58 | 32.0 | 3.35e-01 | 82.4% | 56.8% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 52.0 | 3.87e-01 | 100.0% | 63.8% |
| 1dhkB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 52.0 | 4.04e-01 | 100.0% | 55.9% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 41.0 | 3.93e-01 | 100.0% | 65.1% |
| 3p2hA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 44.0 | 3.56e-01 | 86.8% | 57.6% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 44.0 | 3.27e-01 | 87.9% | 49.2% |
| 3uaqB02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 48.0 | 4.02e-01 | 100.0% | 86.5% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.54 | 48.0 | 3.99e-01 | 97.8% | 90.5% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 3.19e-01 | 81.3% | 74.4% |
| 3pquA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 48.0 | 3.89e-01 | 100.0% | 88.7% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 47.0 | 4.19e-01 | 94.5% | 85.5% |
| 7zghA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 46.0 | 3.02e-01 | 95.6% | 94.0% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 41.0 | 3.14e-01 | 84.6% | 49.3% |
| 3cqfA03 | 3.40.30.40 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Perfringolysin | 0.53 | 43.0 | 3.98e-01 | 91.2% | 84.2% |
| 1egxA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 46.0 | 4.32e-01 | 98.9% | 91.3% |
| 4e3wA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 47.0 | 3.18e-01 | 98.9% | 98.2% |
| 1914A00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.52 | 47.0 | 3.81e-01 | 100.0% | 77.8% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 44.0 | 3.98e-01 | 92.3% | 97.6% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 46.0 | 3.40e-01 | 100.0% | 96.8% |
| 3lodA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 40.0 | 3.48e-01 | 83.5% | 78.6% |
| 2oa9B02 | 3.30.70.3570 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain | 0.52 | 41.0 | 3.70e-01 | 85.7% | 93.7% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 45.0 | 3.30e-01 | 98.9% | 96.9% |
| 1ulvA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 37.0 | 2.69e-01 | 75.8% | 72.1% |
| 1q40D00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 3.56e-01 | 96.7% | 89.1% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 43.0 | 3.14e-01 | 95.6% | 36.3% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 40.0 | 3.72e-01 | 100.0% | 68.4% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.51 | 41.0 | 3.50e-01 | 85.7% | 74.3% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 43.0 | 3.22e-01 | 98.9% | 95.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3627951 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 45.0 | 4.52e-01 | 100.0% | 69.5% |
| 4984607 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.65 | 36.0 | 3.55e-01 | 87.9% | 51.6% |
| 5046652 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.63 | 47.0 | 3.76e-01 | 100.0% | 38.9% |
| 3606895 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.62 | 48.0 | 4.54e-01 | 100.0% | 68.2% |
| 3357481 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.62 | 56.0 | 3.41e-01 | 100.0% | 26.2% |
| 4946504 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 41.0 | 4.60e-01 | 92.3% | 90.0% |
| 3228340 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.60 | 54.0 | 5.27e-01 | 98.9% | 97.0% |
| 3917645 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 44.0 | 4.04e-01 | 100.0% | 59.2% |
| 3642653 | 12.1.1.36 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GHD | 0.60 | 39.0 | 4.27e-01 | 89.0% | 81.3% |
| 3704683 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.59 | 54.0 | 4.50e-01 | 100.0% | 80.6% |
| 3930399 | 4075.1.1.0 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain | 0.59 | 53.0 | 5.18e-01 | 100.0% | 96.0% |
| 3819083 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.58 | 52.0 | 3.82e-01 | 100.0% | 61.6% |
| 3310438 | 5.1.4.145 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TAF1C_beta-prop | 0.58 | 52.0 | 3.29e-01 | 100.0% | 24.4% |
| 4964393 | 236.3.1.1 ↗ | beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 | 0.58 | 45.0 | 4.83e-01 | 96.7% | 100.0% |
| 3429983 | 12.1.1.36 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GHD | 0.58 | 38.0 | 3.65e-01 | 87.9% | 58.1% |
| 4934001 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.57 | 49.0 | 4.46e-01 | 94.5% | 100.0% |
| 3424631 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.57 | 51.0 | 3.70e-01 | 100.0% | 61.5% |
| 3719143 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.57 | 49.0 | 4.28e-01 | 93.4% | 94.1% |
| 3458331 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.57 | 51.0 | 3.69e-01 | 100.0% | 60.0% |
| 136506 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.57 | 51.0 | 4.97e-01 | 100.0% | 97.0% |
| 2769955 | 12.2.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain | 0.57 | 38.0 | 4.41e-01 | 87.9% | 96.9% |
| 4399861 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.55 | 49.0 | 3.57e-01 | 100.0% | 47.3% |
| 4121558 | 10.1.1.25 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N | 0.55 | 49.0 | 3.52e-01 | 100.0% | 45.6% |
| 3968513 | 10.1.1.27 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 | 0.55 | 49.0 | 3.66e-01 | 100.0% | 53.5% |
| 2321284 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 39.0 | 3.63e-01 | 96.7% | 59.6% |
| 3185455 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 49.0 | 3.89e-01 | 100.0% | 66.5% |
| 185577 | 5084.1.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D | 0.54 | 48.0 | 4.00e-01 | 100.0% | 86.7% |
| 4464657 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.54 | 37.0 | 3.92e-01 | 82.4% | 80.0% |
| 3906069 | 10.1.1.20 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TSP_C | 0.54 | 47.0 | 3.60e-01 | 100.0% | 65.5% |
| 3633645 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.54 | 42.0 | 4.03e-01 | 97.8% | 73.3% |
| 4965843 | 2.4.1.19 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › DUF7861 | 0.53 | 38.0 | 3.78e-01 | 91.2% | 72.3% |
| 3941428 | 330.10.1.1 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO | 0.53 | 45.0 | 3.92e-01 | 94.5% | 95.0% |
| 3784673 | 220.1.1.190 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26660 | 0.53 | 47.0 | 3.85e-01 | 98.9% | 83.6% |
| 3727588 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.53 | 43.0 | 2.95e-01 | 90.1% | 24.4% |
| 5037344 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.52 | 42.0 | 3.90e-01 | 90.1% | 97.5% |
| 4987602 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.51 | 42.0 | 3.80e-01 | 90.1% | 93.6% |
| 3472092 | 220.1.1.186 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CAYP2 | 0.51 | 46.0 | 3.72e-01 | 100.0% | 57.6% |
| 3732226 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 45.0 | 3.75e-01 | 98.9% | 89.4% |
| 5047575 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.51 | 42.0 | 3.85e-01 | 94.5% | 97.6% |
| 3601068 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 46.0 | 2.85e-01 | 100.0% | 42.4% |
| 3741434 | 1.1.5.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2 | 0.50 | 41.0 | 2.98e-01 | 89.0% | 81.2% |