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IMGVR_UViG_3300009780_000879-3300009780-Ga0116156_100221608
Arc-VirIMGVR_UViG_3300009780_000879-3300009780-Ga0116156_100221608
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 133-206
Domain cluster:
rep: IMGVR_UViG_3300010353_001907-3300010353-Ga0116236_100266721__D5-66
D2
medium
residues 3-56
Domain cluster:
rep: OM971648.1__UQJ95339.1__IANJMKHF_00434__00433__D3-52
D3
medium
residues 57-132
Domain cluster:
rep: Salt_Pond_R2_restored_H2O_MG_scaffold_3_prodigal-single.1__X__X__00121__D233-288
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tu5A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 48.0 | 4.28e-01 | 86.8% | 63.9% |
| 2e50B02 | 3.30.1120.90 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Nucleosome assembly protein | 0.59 | 36.0 | 3.20e-01 | 81.6% | 40.5% |
| 1zs8A01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.57 | 44.0 | 3.50e-01 | 86.8% | 83.6% |
| 2z17A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 38.0 | 3.55e-01 | 73.7% | 63.8% |
| 4e0aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 37.0 | 3.01e-01 | 75.0% | 60.3% |
| 1qfxA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 45.0 | 3.17e-01 | 100.0% | 77.1% |
| 3ijlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 39.0 | 3.55e-01 | 85.5% | 90.7% |
| 2ql8A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 38.0 | 3.24e-01 | 82.9% | 59.3% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 36.0 | 3.48e-01 | 78.9% | 87.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598140 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 44.0 | 3.65e-01 | 72.4% | 50.4% |
| 4596124 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.61 | 46.0 | 3.63e-01 | 82.9% | 45.5% |
| 3634542 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 45.0 | 3.53e-01 | 90.8% | 52.7% |
| 1491757 | 719.1.1.3 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PAXX | 0.55 | 35.0 | 4.02e-01 | 84.2% | 98.0% |
| 4457615 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.54 | 41.0 | 3.35e-01 | 82.9% | 57.2% |
| 3467088 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.53 | 36.0 | 3.25e-01 | 71.1% | 100.0% |
| 3526482 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.53 | 40.0 | 3.69e-01 | 90.8% | 61.9% |
| 3184124 | 9.4.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › PF26335 | 0.52 | 40.0 | 3.29e-01 | 84.2% | 75.7% |
| 3616441 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 30.0 | 2.69e-01 | 71.1% | 35.8% |