Back to structures

IMGVR_UViG_3300009838_000142-3300009838-Ga0116153_1000243311

Arc-Vir

IMGVR_UViG_3300009838_000142-3300009838-Ga0116153_1000243311

Quality

90.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-72
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a8eA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.83 76.0 6.96e-01 100.0% 81.6%
2a3vB01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.81 73.0 6.52e-01 100.0% 83.0%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 45.0 3.99e-01 73.5% 85.1%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.62 46.0 4.84e-01 82.4% 98.4%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.61 44.0 3.45e-01 75.0% 62.9%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 42.0 4.18e-01 72.1% 81.2%
3on3B00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.59 50.0 3.83e-01 100.0% 46.9%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.42e-01 77.9% 100.0%
1vw4L01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.58 40.0 3.22e-01 80.9% 37.0%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 39.0 3.95e-01 73.5% 80.3%
7ep3A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 43.0 2.91e-01 82.4% 36.4%
2hoqA02 1.10.150.520 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.55 38.0 3.63e-01 72.1% 86.1%
2gh1A02 1.10.150.350 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.54 47.0 4.12e-01 100.0% 85.2%
4mtxD00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.54 36.0 3.18e-01 100.0% 48.4%
3vkgB03 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.54 38.0 3.02e-01 77.9% 48.7%
2gytA01 1.10.287.2070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 42.0 4.24e-01 92.6% 87.3%
1dqeA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.53 47.0 3.68e-01 97.1% 48.2%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.52 34.0 3.62e-01 100.0% 75.4%
2c0gA02 1.20.1150.12 Mainly Alpha › Up-down Bundle › Endoplasmic reticulum protein erp29 › Endoplasmic reticulum resident protein 29, C-terminal domain 0.52 43.0 3.81e-01 97.1% 64.2%
3u61D03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.51 41.0 3.72e-01 86.8% 82.4%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 41.0 3.24e-01 91.2% 88.7%
5hyhA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.51 39.0 2.75e-01 91.2% 69.7%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4356484 604.5.1.1 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div 0.68 60.0 4.23e-01 98.5% 80.8%
5077822 604.5.1.1 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div 0.66 59.0 4.21e-01 100.0% 82.4%
5041910 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.66 57.0 5.29e-01 100.0% 75.6%
3754840 109.4.1.134 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPIN90_LRD 0.62 43.0 2.68e-01 73.5% 29.3%
4837202 3281.1.1.4 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N,NADH5_C 0.62 53.0 3.29e-01 98.5% 43.8%
3630666 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.61 43.0 3.39e-01 73.5% 36.4%
3798780 3198.1.1.1 alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.61 50.0 4.06e-01 92.6% 56.3%
3852891 3164.1.1.0 few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein 0.59 50.0 3.56e-01 98.5% 71.7%
4993593 198.1.1.27 alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 0.58 41.0 3.95e-01 76.5% 71.2%
1046270 3716.1.1.1 alpha arrays › DUF3349 › DUF3349 › DUF3349 › DUF3349 0.57 42.0 3.72e-01 97.1% 50.9%
5002309 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.57 50.0 3.70e-01 98.5% 46.3%
4630325 509.1.1.10 alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › HHD_RTEL1 0.56 40.0 3.89e-01 75.0% 86.7%
4045490 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.56 46.0 4.14e-01 100.0% 64.2%
5005973 3625.1.1.0 alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain 0.56 45.0 4.17e-01 92.6% 87.8%
4009705 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.56 44.0 4.56e-01 91.2% 100.0%
5045435 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 44.0 3.39e-01 92.6% 65.0%
3509286 102.1.1.85 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_KIDINS220 0.53 45.0 4.12e-01 94.1% 94.4%
3355851 2484.1.1.110 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.53 44.0 3.01e-01 98.5% 54.7%
4203130 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.53 39.0 3.30e-01 98.5% 47.0%
3794915 3065.1.1.1 alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › ANIS5_cation-bd 0.52 44.0 3.59e-01 100.0% 48.1%
3623002 1008.1.1.0 alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain 0.52 43.0 3.77e-01 100.0% 59.0%
4180990 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.52 43.0 4.17e-01 95.6% 83.7%
4953123 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.52 42.0 2.59e-01 88.2% 74.8%
4950926 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.51 41.0 2.89e-01 100.0% 26.7%
5066119 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 45.0 2.95e-01 100.0% 22.6%
3895354 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 43.0 3.49e-01 97.1% 69.6%
D2 medium residues 85-104_190-251
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00589.28 best Phage_integrase 46.7 4.30e-12 84.2% 26.7%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.83 75.0 5.40e-01 98.8% 97.3%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.80 73.0 5.26e-01 97.6% 97.6%
1aihA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.80 74.0 5.72e-01 100.0% 92.4%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.79 68.0 5.10e-01 93.9% 100.0%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 42.0 4.33e-01 89.0% 68.8%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 39.0 3.89e-01 93.9% 60.9%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.61 53.0 3.86e-01 95.1% 49.5%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 4.11e-01 90.2% 72.4%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.59 49.0 4.08e-01 91.5% 53.5%
2prrA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.58 51.0 4.44e-01 98.8% 85.0%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.55 45.0 4.24e-01 91.5% 73.2%
2copA00 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.55 40.0 3.70e-01 81.7% 58.7%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.55 44.0 3.71e-01 96.3% 50.7%
3pvlA03 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.53 42.0 3.71e-01 84.1% 75.4%
3v1vA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.53 44.0 3.12e-01 98.8% 78.5%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083506 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 84.0 6.19e-01 100.0% 100.0%
4637388 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 81.0 6.17e-01 97.6% 97.6%
4475168 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 79.0 5.77e-01 95.1% 94.4%
5059725 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 79.0 5.92e-01 96.3% 96.1%
4181053 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 80.0 5.84e-01 100.0% 96.5%
4994277 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 74.0 5.57e-01 93.9% 97.8%
4981966 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 75.0 5.56e-01 100.0% 96.0%
4007744 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 72.0 5.23e-01 93.9% 99.0%
4173465 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.82 52.0 6.17e-01 72.0% 96.4%
4004483 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 75.0 5.57e-01 98.8% 95.3%
4281782 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 58.0 6.10e-01 100.0% 81.3%
3964657 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 66.0 4.89e-01 86.6% 90.8%
4680413 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 59.0 6.58e-01 100.0% 95.4%
3254013 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.79 49.0 5.76e-01 72.0% 86.7%
3985600 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.74 52.0 5.68e-01 82.9% 88.4%
5042123 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.72 51.0 5.33e-01 75.6% 80.0%
3971990 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 43.0 4.26e-01 90.2% 64.7%
5027752 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 46.0 4.71e-01 98.8% 77.5%
2332937 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.61 40.0 4.15e-01 90.2% 73.0%
4024558 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.59 49.0 4.10e-01 90.2% 70.0%
3392384 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 44.0 4.63e-01 84.1% 94.7%
5028151 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 44.0 4.39e-01 87.8% 81.2%
4618625 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.51 41.0 3.79e-01 87.8% 69.5%
3243275 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 44.0 3.52e-01 97.6% 90.9%
D3 medium residues 105-189
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00589.28 best Phage_integrase 43.9 3.10e-11 90.6% 36.0%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a8eA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.91 86.0 6.51e-01 100.0% 53.1%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.87 81.0 5.93e-01 100.0% 63.5%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.87 81.0 5.82e-01 100.0% 57.9%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.83 77.0 6.00e-01 100.0% 56.1%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.83 78.0 5.80e-01 100.0% 52.6%
3m4aA03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.82 75.0 6.71e-01 100.0% 89.8%
1aihA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.80 70.0 5.44e-01 100.0% 46.5%
1a31A03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.80 72.0 5.95e-01 100.0% 71.3%
4eqsA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 43.0 3.46e-01 77.6% 69.4%
1f8wA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 43.0 3.51e-01 78.8% 69.5%
3iwaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 42.0 3.50e-01 77.6% 69.4%
3icsA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 43.0 3.32e-01 78.8% 74.9%
1p6vA00 2.40.280.10 Mainly Beta › Beta Barrel › Small Protein B; Chain: A; › Small protein B 0.58 46.0 4.06e-01 87.1% 84.0%
8ew8A01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.57 43.0 3.17e-01 80.0% 39.7%
1csnA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.56 41.0 3.06e-01 78.8% 31.3%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 34.0 4.01e-01 70.6% 91.2%
3ib5A00 3.10.570.10 Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain 0.55 39.0 2.57e-01 72.9% 23.4%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 41.0 3.84e-01 81.2% 83.3%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 41.0 3.71e-01 83.5% 83.1%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 33.0 3.34e-01 83.5% 60.0%
4am6A02 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.54 42.0 3.55e-01 88.2% 90.3%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.92e-01 87.1% 89.1%
4mnrA02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 43.0 3.02e-01 92.9% 65.5%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 42.0 3.42e-01 87.1% 79.2%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.41e-01 80.0% 94.1%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.52 27.0 3.27e-01 74.1% 80.4%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 40.0 3.96e-01 83.5% 98.9%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.80e-01 92.9% 93.5%
1pzxA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.52 29.0 2.63e-01 96.5% 36.9%
1npeA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 45.0 3.22e-01 100.0% 87.1%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.37e-01 82.4% 79.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.27e-01 80.0% 66.4%
4yy8A02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.51 42.0 2.96e-01 95.3% 90.3%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 42.0 3.68e-01 100.0% 59.9%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.50 40.0 3.96e-01 96.5% 81.7%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4973226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.95 91.0 7.92e-01 100.0% 72.5%
5010452 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.94 89.0 8.05e-01 100.0% 79.1%
4930303 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.93 90.0 7.91e-01 100.0% 73.9%
4936284 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.93 88.0 7.81e-01 100.0% 74.8%
4428937 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 88.0 7.62e-01 100.0% 75.8%
5016981 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 87.0 7.61e-01 100.0% 73.3%
4994277 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 87.0 6.58e-01 100.0% 51.7%
4975762 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 87.0 7.45e-01 100.0% 76.0%
4637388 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 87.0 6.66e-01 100.0% 50.0%
5083506 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 87.0 6.49e-01 100.0% 53.0%
4285602 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 86.0 7.27e-01 100.0% 73.1%
4134015 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 86.0 6.82e-01 100.0% 82.6%
5029991 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 86.0 7.37e-01 100.0% 72.8%
3588206 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 86.0 6.90e-01 100.0% 72.0%
4966682 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 85.0 7.57e-01 100.0% 80.0%
5030307 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 85.0 7.33e-01 100.0% 74.4%
5052502 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 86.0 7.14e-01 100.0% 68.9%
4380833 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 83.0 6.49e-01 100.0% 50.3%
4004713 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 85.0 7.10e-01 100.0% 69.6%
5028332 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 85.0 7.29e-01 100.0% 74.4%
4962932 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 85.0 6.62e-01 100.0% 84.8%
4278298 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 85.0 7.09e-01 100.0% 71.1%
3942448 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 84.0 6.80e-01 100.0% 71.3%
3586881 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 85.0 6.81e-01 100.0% 80.0%
5052541 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 85.0 7.27e-01 100.0% 74.4%
4314510 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 82.0 7.45e-01 100.0% 75.5%
4331898 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 65.0 6.39e-01 75.3% 71.1%
5083074 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 84.0 6.78e-01 100.0% 78.0%
4949702 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 85.0 7.38e-01 100.0% 74.2%
4952765 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 84.0 6.93e-01 100.0% 64.3%
4981577 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 84.0 7.22e-01 100.0% 72.0%
5081700 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 83.0 6.52e-01 100.0% 78.2%
4966032 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.89 83.0 7.00e-01 100.0% 80.6%
3979114 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 83.0 7.02e-01 100.0% 73.1%
4313957 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 82.0 6.88e-01 100.0% 70.4%
4192665 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 82.0 7.18e-01 100.0% 80.8%
4964228 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 81.0 6.86e-01 100.0% 68.9%
4954764 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 78.0 7.21e-01 100.0% 77.1%
4112553 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 82.0 6.69e-01 100.0% 71.7%
184514 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.48e-01 100.0% 84.8%
4413773 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 82.0 6.88e-01 100.0% 68.1%
4095013 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.85e-01 100.0% 82.2%
4210863 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 82.0 6.96e-01 100.0% 70.8%
4153666 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.84e-01 100.0% 70.4%
4959043 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.90e-01 100.0% 83.1%
3964552 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.81e-01 100.0% 71.9%
4120466 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.81e-01 100.0% 71.9%
5054951 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.92e-01 100.0% 74.6%
5080069 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 7.09e-01 100.0% 81.7%
4357768 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.87 81.0 6.92e-01 100.0% 70.8%
5083877 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.82e-01 100.0% 71.1%
3590354 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 6.79e-01 100.0% 73.3%
5016957 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 80.0 6.17e-01 100.0% 56.0%
4118349 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 80.0 6.72e-01 100.0% 66.7%
5032561 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 78.0 7.24e-01 100.0% 79.0%
5037644 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 81.0 7.07e-01 100.0% 73.3%
4969226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 80.0 6.74e-01 100.0% 85.9%
4960057 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 79.0 6.62e-01 100.0% 72.9%
3964171 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 80.0 6.19e-01 100.0% 54.0%
4034370 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 79.0 6.98e-01 100.0% 78.3%
4387164 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 79.0 6.78e-01 100.0% 75.4%
4261355 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 79.0 6.61e-01 100.0% 70.0%
3969558 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.86 79.0 6.68e-01 100.0% 77.0%
4004483 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 5.97e-01 100.0% 51.6%
3943153 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 6.77e-01 100.0% 74.6%
5035582 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 7.05e-01 100.0% 74.8%
4032881 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 6.68e-01 100.0% 71.1%
4996190 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 6.84e-01 100.0% 74.4%
4181053 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 5.85e-01 100.0% 51.0%
4044870 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 6.65e-01 100.0% 77.0%
4180367 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 6.21e-01 100.0% 63.0%
4042318 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 78.0 6.63e-01 100.0% 74.1%
5059725 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 78.0 6.01e-01 100.0% 51.7%
4392937 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.85 80.0 6.36e-01 100.0% 63.2%
4338286 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 79.0 6.63e-01 100.0% 77.8%
4053930 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 78.0 6.39e-01 100.0% 67.3%
4247514 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 78.0 6.60e-01 100.0% 69.6%
5058465 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 79.0 6.82e-01 100.0% 71.2%
3958910 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.84 78.0 6.48e-01 100.0% 70.0%
4929009 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 78.0 6.67e-01 100.0% 73.1%
5027341 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 75.0 6.00e-01 96.5% 53.8%
4940128 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.84 77.0 6.72e-01 100.0% 81.6%
3969115 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 75.0 6.91e-01 100.0% 77.1%
5011490 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 78.0 6.32e-01 100.0% 82.0%
4028841 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 77.0 6.53e-01 100.0% 75.6%
5034904 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 76.0 6.81e-01 98.8% 85.2%
4082783 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 76.0 6.11e-01 100.0% 62.5%
4979786 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 76.0 6.75e-01 100.0% 73.3%
3587645 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 77.0 6.49e-01 100.0% 69.6%
3965072 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.83 77.0 6.57e-01 100.0% 70.8%
4931987 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 77.0 6.97e-01 100.0% 80.0%
4680466 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.82 76.0 6.69e-01 100.0% 77.5%
4183457 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 76.0 6.24e-01 100.0% 66.2%
2319285 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 76.0 6.76e-01 100.0% 74.8%
5076857 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 74.0 5.78e-01 100.0% 52.6%
4177205 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.81 71.0 6.82e-01 100.0% 84.2%
4981563 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 67.0 6.12e-01 89.4% 95.5%
4410774 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 74.0 6.65e-01 100.0% 74.8%
3926774 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 72.0 6.08e-01 100.0% 79.3%
3241191 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.81e-01 92.9% 95.7%