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IMGVR_UViG_3300010120_000109-3300010120-Ga0127451_10399061
Arc-VirIMGVR_UViG_3300010120_000109-3300010120-Ga0127451_10399061
Identity
- Kingdom:
- archaea
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-48
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01025.25 best | GrpE | 45.5 | 9.20e-12 | 100.0% | 24.2% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dkgB02 | 2.30.22.10 | Mainly Beta › Roll › Nucleotide Exchange Factor Grpe; Chain A, domain 2 › Head domain of nucleotide exchange factor GrpE | 0.89 | 81.0 | 7.16e-01 | 100.0% | 71.9% |
| 3a6mA02 | 2.30.22.10 | Mainly Beta › Roll › Nucleotide Exchange Factor Grpe; Chain A, domain 2 › Head domain of nucleotide exchange factor GrpE | 0.87 | 72.0 | 6.49e-01 | 100.0% | 66.7% |
| 3m9gA02 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.55 | 46.0 | 4.00e-01 | 100.0% | 75.0% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047913 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 1.00 | 94.0 | 8.06e-01 | 100.0% | 68.3% |
| 4046571 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.99 | 93.0 | 7.96e-01 | 100.0% | 68.3% |
| 4976007 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.98 | 91.0 | 7.08e-01 | 100.0% | 51.2% |
| 4124894 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.98 | 91.0 | 8.10e-01 | 100.0% | 74.5% |
| 4445928 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.97 | 91.0 | 5.94e-01 | 100.0% | 27.3% |
| 4502174 | 605.1.1.108 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE | 0.97 | 91.0 | 6.32e-01 | 100.0% | 35.7% |
| 4662808 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.97 | 90.0 | 7.52e-01 | 100.0% | 63.1% |
| 4203603 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.96 | 89.0 | 7.78e-01 | 100.0% | 70.7% |
| 4094227 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.96 | 90.0 | 7.82e-01 | 100.0% | 70.7% |
| 4503625 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.96 | 90.0 | 6.13e-01 | 100.0% | 33.3% |
| 4053915 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.96 | 90.0 | 7.83e-01 | 100.0% | 70.7% |
| 4662976 | 706.1.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE | 0.96 | 87.0 | 7.78e-01 | 100.0% | 72.7% |
| 4328747 | 148.1.3.209 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › GrpE | 0.96 | 89.0 | 6.22e-01 | 100.0% | 36.0% |
| 4043139 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.96 | 84.0 | 7.64e-01 | 100.0% | 73.6% |
| 4967038 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.96 | 86.0 | 7.45e-01 | 100.0% | 66.7% |
| 4402754 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.95 | 89.0 | 7.68e-01 | 100.0% | 69.5% |
| 4484233 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.95 | 85.0 | 7.56e-01 | 95.1% | 70.9% |
| 4428959 | 3939.1.1.145 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › GrpE | 0.95 | 88.0 | 5.90e-01 | 100.0% | 30.4% |
| 4083033 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.94 | 87.0 | 7.75e-01 | 100.0% | 74.5% |
| 3634825 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.94 | 86.0 | 7.34e-01 | 100.0% | 65.1% |
| 3610994 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.93 | 86.0 | 7.44e-01 | 100.0% | 70.0% |
| 3643817 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.93 | 85.0 | 7.35e-01 | 100.0% | 70.0% |
| 4487102 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.93 | 82.0 | 5.80e-01 | 95.1% | 35.5% |
| 4644405 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.93 | 81.0 | 7.29e-01 | 97.6% | 70.9% |
| 4532990 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.93 | 85.0 | 7.38e-01 | 100.0% | 68.3% |
| 4300671 | 148.1.3.209 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › GrpE | 0.93 | 85.0 | 6.00e-01 | 100.0% | 36.3% |
| 3540230 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.92 | 84.0 | 7.32e-01 | 100.0% | 70.0% |
| 5084043 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.92 | 84.0 | 7.54e-01 | 100.0% | 74.5% |
| 4606810 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.92 | 85.0 | 5.64e-01 | 100.0% | 29.3% |
| 3596541 | 706.1.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE | 0.91 | 83.0 | 7.22e-01 | 100.0% | 70.0% |
| 3205739 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.91 | 83.0 | 7.24e-01 | 100.0% | 68.3% |
| 5061516 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.89 | 81.0 | 7.28e-01 | 100.0% | 74.5% |
| 4599975 | 706.1.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE | 0.88 | 79.0 | 6.92e-01 | 100.0% | 75.0% |
| 4101994 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.84 | 74.0 | 6.37e-01 | 100.0% | 69.2% |
| 4360491 | 148.1.3.209 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › GrpE | 0.83 | 77.0 | 5.07e-01 | 100.0% | 29.0% |