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IMGVR_UViG_3300010236_000122-3300010236-Ga0136246_1000277311
Arc-VirIMGVR_UViG_3300010236_000122-3300010236-Ga0136246_1000277311
Identity
- Kingdom:
- archaea
Quality
81.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-40
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pg5B02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.75 | 62.0 | 5.28e-01 | 100.0% | 70.2% |
| 1vwxp00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.74 | 57.0 | 4.25e-01 | 100.0% | 33.0% |
| 4e2xA01 | 6.20.50.110 | Special › Other non-globular › N-terminal domain of TfIIb › Methyltransferase, zinc-binding domain | 0.73 | 62.0 | 5.31e-01 | 100.0% | 98.1% |
| 1l1oC02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.71 | 51.0 | 5.09e-01 | 100.0% | 78.9% |
| 5flxf00 | 6.20.50.150 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.68 | 50.0 | 4.15e-01 | 100.0% | 42.5% |
| 3u50C02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.62 | 45.0 | 4.46e-01 | 100.0% | 80.0% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.62 | 48.0 | 4.10e-01 | 100.0% | 53.2% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.60 | 46.0 | 4.00e-01 | 100.0% | 51.6% |
| 2cjgA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 43.0 | 2.83e-01 | 100.0% | 16.9% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.57 | 39.0 | 3.80e-01 | 71.9% | 61.5% |
| 2bwnB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 40.0 | 2.65e-01 | 100.0% | 17.0% |
| 4b9dB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 41.0 | 3.11e-01 | 96.9% | 30.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 43.0 | 3.43e-01 | 100.0% | 55.7% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 42.0 | 3.91e-01 | 100.0% | 78.7% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 3.26e-01 | 100.0% | 44.1% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3403345 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.89 | 76.0 | 4.66e-01 | 100.0% | 18.4% |
| 3388463 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.88 | 76.0 | 4.86e-01 | 100.0% | 23.4% |
| 4397965 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.86 | 68.0 | 4.45e-01 | 100.0% | 21.4% |
| 3401149 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.79 | 66.0 | 4.00e-01 | 100.0% | 16.1% |
| 3433309 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 67.0 | 6.23e-01 | 100.0% | 80.0% |
| 3667651 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 66.0 | 4.78e-01 | 100.0% | 35.6% |
| 3222612 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 64.0 | 4.60e-01 | 100.0% | 34.7% |
| 4129260 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.74 | 60.0 | 5.40e-01 | 100.0% | 80.0% |
| 3398992 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 63.0 | 4.56e-01 | 100.0% | 36.7% |
| 4946465 | 375.1.4.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain | 0.73 | 61.0 | 5.38e-01 | 100.0% | 80.0% |
| 4072840 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.73 | 61.0 | 5.55e-01 | 100.0% | 88.9% |
| 3925225 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 60.0 | 5.92e-01 | 100.0% | 91.4% |
| 5074404 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.72 | 59.0 | 5.11e-01 | 100.0% | 72.7% |
| 4933580 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.71 | 58.0 | 5.05e-01 | 100.0% | 74.5% |
| 4941637 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.71 | 58.0 | 5.07e-01 | 100.0% | 81.1% |
| 4122731 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.70 | 56.0 | 4.80e-01 | 100.0% | 69.5% |
| 3258369 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 53.0 | 5.24e-01 | 100.0% | 84.2% |
| 3938955 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 55.0 | 5.06e-01 | 100.0% | 75.6% |
| 4276264 | 375.8.1.5 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › PF26372 | 0.67 | 54.0 | 4.96e-01 | 96.9% | 68.9% |
| 5084051 | 375.8.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › TRAM | 0.65 | 52.0 | 5.14e-01 | 100.0% | 91.4% |
| 4928216 | 375.1.4.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain | 0.64 | 51.0 | 5.06e-01 | 96.9% | 94.3% |
| 3955489 | 2484.1.1.211 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB | 0.64 | 49.0 | 3.11e-01 | 100.0% | 17.1% |
| 3503021 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.63 | 48.0 | 4.77e-01 | 100.0% | 91.4% |
| 5051552 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 46.0 | 3.49e-01 | 100.0% | 40.0% |
| 5005813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 41.0 | 3.79e-01 | 100.0% | 52.0% |
| 3425088 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.58 | 42.0 | 3.54e-01 | 87.5% | 78.5% |
| 3354326 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.57 | 43.0 | 3.66e-01 | 100.0% | 48.3% |
| 5079023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 3.90e-01 | 100.0% | 64.4% |
| 4889754 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.56 | 39.0 | 3.37e-01 | 75.0% | 43.3% |
| 1140051 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 42.0 | 3.86e-01 | 100.0% | 75.5% |
| 4566525 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.54 | 41.0 | 2.38e-01 | 100.0% | 34.7% |
| 3479395 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.52 | 40.0 | 4.06e-01 | 96.9% | 93.9% |
| 4934260 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 33.0 | 3.26e-01 | 100.0% | 61.1% |