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IMGVR_UViG_3300010239_000001-3300010239-Ga0136451_10000010524
Arc-VirIMGVR_UViG_3300010239_000001-3300010239-Ga0136451_10000010524
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-107
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.78 | 73.0 | 7.04e-01 | 100.0% | 90.2% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.71 | 65.0 | 6.56e-01 | 97.0% | 100.0% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.69 | 64.0 | 6.08e-01 | 100.0% | 92.2% |
| 1shyA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 51.0 | 5.12e-01 | 100.0% | 77.5% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.68 | 59.0 | 5.81e-01 | 100.0% | 89.0% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.66 | 49.0 | 5.33e-01 | 100.0% | 100.0% |
| 4paaA05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.65 | 37.0 | 4.14e-01 | 83.0% | 70.9% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.65 | 59.0 | 5.16e-01 | 100.0% | 85.2% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 44.0 | 4.53e-01 | 70.0% | 75.3% |
| 1ow0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 41.0 | 4.13e-01 | 70.0% | 66.0% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.61 | 45.0 | 4.41e-01 | 100.0% | 71.6% |
| 8ct0B01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 56.0 | 4.67e-01 | 100.0% | 71.7% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.60 | 55.0 | 4.70e-01 | 100.0% | 76.9% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 39.0 | 3.98e-01 | 70.0% | 68.0% |
| 6a2bB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 3.99e-01 | 71.0% | 70.2% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 3.74e-01 | 71.0% | 60.6% |
| 4jvuA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 3.93e-01 | 71.0% | 64.5% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 45.0 | 4.48e-01 | 100.0% | 79.4% |
| 2qqpA03 | 2.60.40.4260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 34.0 | 3.13e-01 | 71.0% | 42.3% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 39.0 | 3.33e-01 | 71.0% | 72.6% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 30.0 | 2.79e-01 | 100.0% | 39.4% |
| 2olgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 50.0 | 4.63e-01 | 100.0% | 82.2% |
| 1txkB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.67e-01 | 73.0% | 68.7% |
| 2vpaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 48.0 | 3.82e-01 | 100.0% | 64.7% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.52 | 47.0 | 4.26e-01 | 100.0% | 91.9% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 35.0 | 3.50e-01 | 71.0% | 87.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.81 | 55.0 | 5.69e-01 | 100.0% | 73.7% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.80 | 74.0 | 7.34e-01 | 100.0% | 94.3% |
| 119252 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.78 | 73.0 | 7.04e-01 | 100.0% | 90.2% |
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 68.0 | 6.85e-01 | 100.0% | 94.0% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 62.0 | 6.67e-01 | 99.0% | 98.8% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 72.0 | 7.06e-01 | 100.0% | 97.1% |
| 5003311 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 68.0 | 6.61e-01 | 100.0% | 97.3% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.72 | 67.0 | 6.49e-01 | 100.0% | 91.8% |
| 4879695 | 1.1.13.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 | 0.68 | 63.0 | 5.71e-01 | 100.0% | 76.5% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.68 | 50.0 | 5.49e-01 | 100.0% | 96.3% |
| 4988096 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 63.0 | 6.01e-01 | 100.0% | 97.4% |
| 119197 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.68 | 59.0 | 5.81e-01 | 100.0% | 89.0% |
| 3896293 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.66 | 42.0 | 4.23e-01 | 70.0% | 64.0% |
| 3816594 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.63 | 48.0 | 3.65e-01 | 100.0% | 33.8% |
| 3838528 | 319.3.1.0 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ | 0.63 | 43.0 | 4.19e-01 | 71.0% | 97.4% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.63 | 57.0 | 5.67e-01 | 97.0% | 100.0% |
| 3913489 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.61 | 41.0 | 3.94e-01 | 71.0% | 59.1% |
| 3957568 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 43.0 | 4.38e-01 | 74.0% | 75.8% |
| 3885308 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.60 | 41.0 | 3.87e-01 | 71.0% | 58.3% |
| 3490403 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.60 | 35.0 | 3.36e-01 | 74.0% | 48.3% |
| 3597372 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.54 | 47.0 | 3.44e-01 | 97.0% | 90.5% |
| 3579511 | 11.1.1.842 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C | 0.53 | 37.0 | 3.01e-01 | 71.0% | 48.6% |
| 5028431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.89e-01 | 82.0% | 88.7% |