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IMGVR_UViG_3300010239_000003-3300010239-Ga0136451_10000014722

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300010239_000003-3300010239-Ga0136451_10000014722 ↗
Kingdom:: archaea

Quality

81.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-91

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2a2cA03	1.20.1440.340	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.83	57.0	4.60e-01	71.1%	100.0%
1z0pA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.73	56.0	5.73e-01	81.6%	100.0%
4akvA02	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.71	51.0	3.79e-01	75.0%	82.6%
1f45B00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.70	50.0	4.14e-01	75.0%	94.7%
3s84A02	1.20.120.20	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein	0.69	48.0	3.81e-01	73.7%	72.0%
2gsqA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.67	52.0	4.58e-01	81.6%	89.8%
3lssA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.66	46.0	4.07e-01	73.7%	91.1%
3nkzA00	1.20.58.380	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit.	0.65	52.0	4.83e-01	88.2%	77.3%
3nrxA00	1.20.58.1520	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.60	41.0	3.56e-01	71.1%	48.0%
4hz4A02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.60	46.0	4.00e-01	81.6%	72.3%
2pusA04	6.10.140.300	Special › Helix non-globular › Helix Hairpins ›	0.57	39.0	3.47e-01	71.1%	59.3%
2b5dX01	3.20.110.10	Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain	0.55	45.0	2.91e-01	93.4%	40.1%
1whuA00	1.10.10.400	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain	0.54	40.0	3.67e-01	90.8%	59.6%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3240634	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.83	57.0	4.39e-01	71.1%	79.4%
3839810	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.76	53.0	4.30e-01	72.4%	62.1%
3806943	375.1.9.21 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › DUF3754	0.75	52.0	4.98e-01	71.1%	63.5%
3194783	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.73	58.0	5.01e-01	84.2%	63.5%
3808261	3826.1.1.27 ↗	alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF3754	0.72	50.0	4.80e-01	71.1%	63.5%
4034406	632.15.1.1 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › CompInhib_SCIN	0.72	48.0	4.69e-01	71.1%	62.4%
5035167	2004.1.1.87 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N	0.62	52.0	3.25e-01	90.8%	28.6%
3608485	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.60	42.0	3.74e-01	73.7%	83.5%