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IMGVR_UViG_3300010239_000011-3300010239-Ga0136451_1000010601
Arc-VirIMGVR_UViG_3300010239_000011-3300010239-Ga0136451_1000010601
Identity
- Kingdom:
- archaea
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-25
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6opmD01 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.73 | 51.0 | 3.01e-01 | 88.0% | 9.7% |
| 1v1hA02 | 6.20.230.10 | Special › Other non-globular › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.64 | 42.0 | 4.30e-01 | 76.0% | 66.7% |
| 1x62A01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.60 | 41.0 | 3.56e-01 | 92.0% | 41.7% |
| 1nayB00 | 1.20.5.320 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 6-Phosphogluconate Dehydrogenase, domain 3 | 0.59 | 40.0 | 3.41e-01 | 80.0% | 34.5% |
| 6u4mA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.59 | 40.0 | 3.35e-01 | 84.0% | 33.8% |
| 1ox3A00 | 1.20.5.320 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 6-Phosphogluconate Dehydrogenase, domain 3 | 0.58 | 40.0 | 2.79e-01 | 80.0% | 17.6% |
| 2darA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.58 | 37.0 | 3.14e-01 | 88.0% | 30.6% |
| 4cbgD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 2.84e-01 | 80.0% | 41.0% |
| 1avyB00 | 1.20.5.320 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 6-Phosphogluconate Dehydrogenase, domain 3 | 0.56 | 37.0 | 3.29e-01 | 76.0% | 37.0% |
| 2d8yA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.56 | 38.0 | 3.15e-01 | 84.0% | 33.3% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 2.79e-01 | 80.0% | 85.8% |
| 2lp7A00 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 39.0 | 3.26e-01 | 76.0% | 32.2% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 35.0 | 2.43e-01 | 88.0% | 16.4% |
| 3p3vA00 | 3.40.35.10 | Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component | 0.52 | 33.0 | 2.11e-01 | 72.0% | 23.6% |
| 1igrA01 | 3.80.20.20 | Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain | 0.51 | 33.0 | 2.12e-01 | 80.0% | 9.8% |
| 3b1dA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 37.0 | 2.24e-01 | 76.0% | 8.4% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995731 | 502.1.1.0 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain | 0.69 | 46.0 | 3.88e-01 | 88.0% | 36.7% |
| 4998780 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.68 | 46.0 | 2.68e-01 | 88.0% | 8.0% |
| 3252156 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 46.0 | 4.36e-01 | 84.0% | 57.5% |
| 3403530 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.66 | 45.0 | 4.61e-01 | 84.0% | 73.3% |
| 3297183 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 44.0 | 4.56e-01 | 84.0% | 73.3% |
| 4000690 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.65 | 45.0 | 3.95e-01 | 84.0% | 42.0% |
| 3618097 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.64 | 48.0 | 3.87e-01 | 80.0% | 33.3% |
| 3781458 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.63 | 43.0 | 4.19e-01 | 84.0% | 52.5% |
| 5021070 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.63 | 41.0 | 4.18e-01 | 88.0% | 62.9% |
| 3435304 | 376.1.1.52 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM | 0.62 | 42.0 | 3.41e-01 | 84.0% | 32.3% |
| 3506998 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.61 | 42.0 | 4.22e-01 | 76.0% | 76.7% |
| 3509992 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.61 | 42.0 | 4.28e-01 | 84.0% | 73.3% |
| 3800813 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 40.0 | 4.10e-01 | 84.0% | 60.0% |
| 3712132 | 5081.1.1.2 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DER1 | 0.60 | 44.0 | 2.72e-01 | 80.0% | 10.3% |
| 4172765 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.59 | 42.0 | 4.32e-01 | 80.0% | 70.0% |
| 3817112 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.58 | 49.0 | 3.10e-01 | 88.0% | 15.3% |
| 3561934 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.57 | 38.0 | 3.91e-01 | 84.0% | 60.0% |
| 4014333 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.57 | 37.0 | 3.78e-01 | 92.0% | 65.7% |
| 3398343 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.56 | 40.0 | 3.99e-01 | 84.0% | 65.7% |
| 3193318 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.55 | 37.0 | 3.86e-01 | 84.0% | 70.0% |
| 4959095 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.54 | 38.0 | 3.65e-01 | 92.0% | 82.5% |
| 4403563 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.54 | 39.0 | 4.04e-01 | 84.0% | 70.0% |
| 2127596 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.54 | 37.0 | 3.82e-01 | 80.0% | 73.1% |
| 3583674 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 42.0 | 2.86e-01 | 84.0% | 18.4% |
| 3247036 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.53 | 36.0 | 2.08e-01 | 88.0% | 6.9% |
| 3261517 | 5081.1.1.4 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 | 0.53 | 38.0 | 2.49e-01 | 80.0% | 12.9% |