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IMGVR_UViG_3300010286_000195-3300010286-Ga0134092_100019380
Arc-VirIMGVR_UViG_3300010286_000195-3300010286-Ga0134092_100019380
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-107
Domain cluster:
rep: rifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00003__D9-108
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xeqB00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.62 | 36.0 | 3.73e-01 | 98.9% | 61.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959549 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.58 | 36.0 | 2.83e-01 | 100.0% | 29.7% |
| 1828354 | 3998.1.1.1 ↗ | alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 | 0.56 | 25.0 | 2.37e-01 | 90.0% | 34.9% |
| 3913082 | 3352.1.1.19 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans2 | 0.56 | 47.0 | 3.02e-01 | 95.6% | 49.6% |
| 4999332 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.53 | 36.0 | 3.08e-01 | 100.0% | 42.1% |
| 3687384 | 5069.1.1.58 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF2427, Ytp1 | 0.53 | 40.0 | 3.17e-01 | 83.3% | 83.3% |
| 3743714 | 109.4.1.117 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG,SCD | 0.53 | 45.0 | 3.08e-01 | 100.0% | 57.8% |
| 4973028 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 32.0 | 3.43e-01 | 70.0% | 70.0% |
| 3597413 | 630.1.1.0 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain | 0.51 | 43.0 | 3.49e-01 | 93.3% | 89.1% |
| 3707839 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 37.0 | 2.91e-01 | 77.8% | 68.3% |
| 5057188 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.50 | 35.0 | 2.55e-01 | 72.2% | 31.4% |