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IMGVR_UViG_3300010296_003993-3300010296-Ga0129348_10015451

Arc-Vir

IMGVR_UViG_3300010296_003993-3300010296-Ga0129348_10015451

Quality

92.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-97
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01041.24 best DegT_DnrJ_EryC1 30.2 3.80e-07 93.7% 20.8%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fnuA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.90 65.0 4.66e-01 75.8% 29.0%
4rxkA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.88 65.0 4.64e-01 76.8% 29.2%
2c81A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.85 61.0 4.35e-01 73.7% 31.9%
3ju7A00 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.80 71.0 4.62e-01 93.7% 37.5%
2dgmA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 46.0 3.29e-01 89.5% 28.9%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080724 7577.1.1.6 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 0.90 68.0 4.82e-01 81.1% 30.2%
4880190 3016.1.1.6 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › DegT_DnrJ_EryC1 0.86 69.0 5.04e-01 84.2% 35.1%
5055799 7577.1.1.6 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 0.85 75.0 4.94e-01 94.7% 45.0%
5057023 7577.1.1.6 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 0.83 68.0 4.75e-01 86.3% 30.5%
5051781 7577.1.1.6 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 0.82 72.0 4.64e-01 93.7% 36.0%
4943259 7577.1.1.6 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 0.81 67.0 4.66e-01 86.3% 30.5%
4974368 7577.1.1.6 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 0.79 64.0 4.50e-01 86.3% 30.9%