←Back to structures
IMGVR_UViG_3300010310_000357-3300010310-Ga0116235_13269697
Arc-VirIMGVR_UViG_3300010310_000357-3300010310-Ga0116235_13269697
Identity
- Kingdom:
- archaea
Quality
71.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-39
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lktA00 | 2.170.14.10 | Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain | 0.65 | 44.0 | 3.20e-01 | 70.3% | 35.6% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.63 | 44.0 | 2.85e-01 | 73.0% | 15.2% |
| 6p2uA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.58 | 40.0 | 3.81e-01 | 81.1% | 63.5% |
| 4fpvB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.57 | 40.0 | 2.53e-01 | 83.8% | 16.3% |
| 2e1mA05 | 1.10.405.10 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 | 0.57 | 38.0 | 2.91e-01 | 70.3% | 29.7% |
| 4chkB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 45.0 | 3.43e-01 | 86.5% | 80.2% |
| 6xgqb01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.56 | 41.0 | 3.17e-01 | 83.8% | 47.3% |
| 3d4rE01 | 2.40.128.400 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 38.0 | 3.10e-01 | 75.7% | 42.9% |
| 4id8A00 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.25e-01 | 75.7% | 40.0% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.54 | 37.0 | 3.17e-01 | 73.0% | 54.5% |
| 1p9gA00 | 3.30.60.10 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Endochitinase-like | 0.51 | 37.0 | 3.71e-01 | 100.0% | 92.5% |
| 2gy5A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 2.69e-01 | 70.3% | 45.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3401480 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.71 | 48.0 | 3.94e-01 | 70.3% | 38.6% |
| 2817686 | 1173.1.1.1 ↗ | beta barrels › UL128 C-terminal domain › UL128 C-terminal domain › UL128 C-terminal domain › UL128 | 0.70 | 50.0 | 4.63e-01 | 81.1% | 70.6% |
| 3825599 | 212.1.1.10 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › RNase_PH | 0.65 | 47.0 | 2.99e-01 | 78.4% | 33.5% |
| 3575279 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 45.0 | 3.64e-01 | 86.5% | 90.0% |
| 4679376 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.58 | 48.0 | 3.26e-01 | 100.0% | 25.3% |
| 3212038 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.57 | 43.0 | 3.02e-01 | 83.8% | 85.7% |
| 3386704 | 221.8.1.3 ↗ | a+b two layers › beta-Grasp › GfcC › GfcC › SLBB | 0.56 | 41.0 | 3.50e-01 | 86.5% | 84.0% |
| 3627281 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.08e-01 | 100.0% | 87.3% |
| 4074154 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.53 | 37.0 | 3.59e-01 | 78.4% | 75.6% |
| 3242772 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.53 | 38.0 | 3.62e-01 | 100.0% | 73.3% |
| 3972231 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 2.55e-01 | 73.0% | 40.3% |