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IMGVR_UViG_3300010327_000704-3300010327-Ga0116246_1000102126
Arc-VirIMGVR_UViG_3300010327_000704-3300010327-Ga0116246_1000102126
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-110_157-204
Domain cluster:
rep: MT764210__UXF49854.1__7841G1D8-26__00026__D257-398
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.83 | 65.0 | 6.95e-01 | 94.6% | 92.3% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.76 | 63.0 | 6.51e-01 | 98.0% | 92.6% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.75 | 45.0 | 5.43e-01 | 95.2% | 88.9% |
| 2n54B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.75 | 18.0 | 2.83e-01 | 74.1% | 48.5% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.75 | 57.0 | 6.06e-01 | 95.2% | 90.6% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.73 | 67.0 | 5.86e-01 | 96.6% | 76.7% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.73 | 32.0 | 4.31e-01 | 76.2% | 76.9% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 40.0 | 4.42e-01 | 85.7% | 69.0% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 31.0 | 3.14e-01 | 97.3% | 40.9% |
| 1pzdA01 | 2.60.40.1480 | Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain | 0.67 | 39.0 | 3.85e-01 | 86.4% | 53.2% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 33.0 | 4.09e-01 | 80.3% | 76.7% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 35.0 | 4.06e-01 | 79.6% | 70.0% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.63 | 35.0 | 4.45e-01 | 92.5% | 93.0% |
| 1s3rA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.61 | 23.0 | 3.92e-01 | 78.9% | 100.0% |
| 2cwrA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 34.0 | 4.15e-01 | 88.4% | 84.5% |
| 4afhE00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.59 | 46.0 | 4.06e-01 | 96.6% | 56.1% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.59 | 48.0 | 3.62e-01 | 87.1% | 44.1% |
| 6qdwt00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 36.0 | 4.25e-01 | 95.9% | 94.6% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 26.0 | 3.27e-01 | 70.1% | 66.3% |
| 2zomA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 33.0 | 3.82e-01 | 86.4% | 77.6% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 33.0 | 3.80e-01 | 87.8% | 78.1% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 34.0 | 3.95e-01 | 87.1% | 82.1% |
| 4iyqA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 33.0 | 3.72e-01 | 88.4% | 76.6% |
| 3nrfA00 | 2.60.40.4110 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 | 0.56 | 34.0 | 3.97e-01 | 88.4% | 86.3% |
| 3cfuA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 39.0 | 3.95e-01 | 85.7% | 71.5% |
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 49.0 | 4.01e-01 | 94.6% | 77.0% |
| 3ialA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 49.0 | 3.93e-01 | 94.6% | 75.8% |
| 1pu4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.54 | 45.0 | 3.26e-01 | 89.8% | 88.2% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 21.0 | 2.66e-01 | 89.8% | 54.4% |
| 3jafA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.53 | 42.0 | 3.75e-01 | 95.9% | 59.2% |
| 3ejvA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 28.0 | 2.81e-01 | 98.0% | 47.8% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 32.0 | 3.41e-01 | 96.6% | 70.5% |
| 4c98A02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 33.0 | 3.47e-01 | 76.9% | 71.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004177 | 304.124.1.3 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 | 0.86 | 66.0 | 7.23e-01 | 94.6% | 92.8% |
| 4928893 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.79 | 68.0 | 6.88e-01 | 95.2% | 91.0% |
| 3948250 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.77 | 69.0 | 6.80e-01 | 98.0% | 90.3% |
| 5040945 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.76 | 67.0 | 6.69e-01 | 98.0% | 90.0% |
| 3970985 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.76 | 65.0 | 6.64e-01 | 95.9% | 93.6% |
| 5454 | 304.124.1.2 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Gp37 | 0.76 | 63.0 | 6.55e-01 | 98.0% | 94.0% |
| 3585212 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.76 | 71.0 | 6.13e-01 | 98.6% | 89.8% |
| 3589225 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.74 | 61.0 | 6.35e-01 | 95.9% | 93.3% |
| 5083619 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.74 | 62.0 | 6.33e-01 | 95.2% | 90.9% |
| None | — | 0.73 | 44.0 | 5.23e-01 | 94.6% | 87.0% | |
| 364035 | 304.124.1.1 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_U | 0.71 | 56.0 | 5.92e-01 | 95.2% | 92.5% |
| 3972051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 43.0 | 4.53e-01 | 93.9% | 70.8% |
| 5004168 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 35.0 | 4.02e-01 | 80.3% | 70.0% |
| 3895949 | 243.3.1.2 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cathelicidins | 0.59 | 31.0 | 3.44e-01 | 97.3% | 63.5% |
| 2552604 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 29.0 | 3.00e-01 | 98.6% | 47.4% |
| 4940026 | 4081.1.1.17 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF7345 | 0.58 | 41.0 | 3.94e-01 | 81.6% | 62.3% |
| 409322 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.57 | 34.0 | 3.91e-01 | 86.4% | 80.4% |
| 4419521 | 243.1.1.108 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_YvbJ | 0.57 | 31.0 | 3.22e-01 | 98.6% | 54.8% |
| None | — | 0.56 | 49.0 | 3.65e-01 | 94.6% | 59.7% | |
| 5056516 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.56 | 27.0 | 2.14e-01 | 77.6% | 21.0% |
| 3965192 | 1.1.13.67 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 | 0.54 | 40.0 | 4.45e-01 | 94.6% | 99.1% |
| 3388698 | 825.1.1.0 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins | 0.54 | 35.0 | 3.44e-01 | 95.2% | 58.2% |
| 3965126 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.53 | 33.0 | 2.45e-01 | 87.8% | 22.8% |
| 3186682 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.53 | 33.0 | 3.27e-01 | 94.6% | 59.4% |
| 5056621 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.52 | 39.0 | 3.86e-01 | 93.9% | 72.9% |
| 3529818 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 45.0 | 4.53e-01 | 96.6% | 96.7% |
| 1312442 | 12.1.1.43 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_38 | 0.52 | 34.0 | 3.84e-01 | 96.6% | 85.3% |
| 5017990 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 30.0 | 3.32e-01 | 79.6% | 71.8% |
| 3492448 | 872.3.1.7 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 | 0.51 | 33.0 | 3.89e-01 | 93.9% | 95.0% |
| 3284250 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.51 | 27.0 | 3.45e-01 | 76.9% | 90.0% |
| 2753608 | 825.1.1.2 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › ETX_MTX2 | 0.51 | 45.0 | 3.66e-01 | 100.0% | 86.4% |