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IMGVR_UViG_3300010332_000231-3300010332-Ga0116200_1000007430
Arc-VirIMGVR_UViG_3300010332_000231-3300010332-Ga0116200_1000007430
Identity
- Kingdom:
- archaea
Quality
73.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-100
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oygA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.67 | 58.0 | 3.52e-01 | 100.0% | 27.4% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 52.0 | 3.91e-01 | 90.3% | 41.1% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 56.0 | 4.42e-01 | 98.4% | 90.2% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 52.0 | 4.17e-01 | 95.2% | 91.4% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 51.0 | 5.06e-01 | 91.9% | 95.4% |
| 4egwA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.60 | 36.0 | 2.84e-01 | 72.6% | 28.2% |
| 3cygA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.60 | 48.0 | 4.01e-01 | 93.5% | 95.0% |
| 2jq5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 47.0 | 3.96e-01 | 96.8% | 93.8% |
| 2jzlA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.60 | 49.0 | 4.13e-01 | 95.2% | 94.6% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 49.0 | 3.78e-01 | 96.8% | 45.5% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 50.0 | 3.18e-01 | 100.0% | 61.0% |
| 4qqsB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 49.0 | 3.22e-01 | 100.0% | 90.7% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 49.0 | 3.91e-01 | 95.2% | 88.5% |
| 7c5wA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 48.0 | 3.75e-01 | 95.2% | 98.0% |
| 1ddgA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 41.0 | 3.50e-01 | 77.4% | 67.5% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 47.0 | 3.86e-01 | 93.5% | 86.3% |
| 1xg9A02 | 3.10.25.20 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › | 0.58 | 40.0 | 4.08e-01 | 74.2% | 100.0% |
| 2ihmB03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.57 | 42.0 | 3.53e-01 | 80.6% | 48.2% |
| 1szsA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 48.0 | 3.57e-01 | 95.2% | 53.9% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 48.0 | 3.66e-01 | 98.4% | 42.9% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.56 | 46.0 | 4.15e-01 | 88.7% | 73.5% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.56 | 41.0 | 3.80e-01 | 80.6% | 71.1% |
| 1x6cA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 47.0 | 3.85e-01 | 96.8% | 56.8% |
| 7jiuA03 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.55 | 46.0 | 3.68e-01 | 98.4% | 77.9% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 40.0 | 3.05e-01 | 88.7% | 81.0% |
| 4f3lA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 40.0 | 3.41e-01 | 88.7% | 88.3% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 38.0 | 3.41e-01 | 77.4% | 82.2% |
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.53 | 44.0 | 2.95e-01 | 98.4% | 27.6% |
| 7uclA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 39.0 | 3.46e-01 | 83.9% | 79.4% |
| 4cckA03 | 3.90.930.40 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.53 | 46.0 | 3.52e-01 | 100.0% | 89.7% |
| 3biqA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.52 | 43.0 | 2.95e-01 | 100.0% | 59.9% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 36.0 | 2.92e-01 | 72.6% | 36.8% |
| 2xfmA00 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.52 | 42.0 | 3.47e-01 | 93.5% | 79.2% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.51 | 41.0 | 3.66e-01 | 87.1% | 85.4% |
| 3fvzA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 43.0 | 2.76e-01 | 98.4% | 29.5% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 36.0 | 2.86e-01 | 75.8% | 37.9% |
| 2fpnA02 | 3.30.360.40 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › YwmB-like | 0.50 | 39.0 | 3.89e-01 | 95.2% | 87.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.70 | 60.0 | 4.10e-01 | 96.8% | 39.1% | |
| 3283411 | 243.1.1.7 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N | 0.67 | 54.0 | 4.51e-01 | 90.3% | 83.6% |
| 3802164 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.67 | 58.0 | 3.71e-01 | 100.0% | 90.9% |
| 3280323 | 243.1.1.7 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N | 0.65 | 52.0 | 4.46e-01 | 90.3% | 94.3% |
| 4123449 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.65 | 48.0 | 4.32e-01 | 79.0% | 72.9% |
| 4594248 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.65 | 56.0 | 4.36e-01 | 98.4% | 87.9% |
| 4930531 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 50.0 | 4.28e-01 | 88.7% | 100.0% |
| 3715739 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.63 | 50.0 | 3.09e-01 | 93.5% | 31.6% |
| 3950757 | 243.1.1.7 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N | 0.62 | 49.0 | 4.13e-01 | 90.3% | 85.2% |
| 3589630 | 243.4.1.4 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DUF1292 | 0.62 | 47.0 | 4.18e-01 | 82.3% | 72.2% |
| 3498991 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 51.0 | 3.39e-01 | 96.8% | 92.3% |
| 3186184 | 270.1.1.0 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related | 0.61 | 44.0 | 3.36e-01 | 79.0% | 73.1% |
| 3604640 | 3740.1.1.1 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C | 0.60 | 49.0 | 3.31e-01 | 91.9% | 62.0% |
| 4057923 | 192.14.1.2 ↗ | alpha bundles › Long alpha-hairpin › Siah interacting protein N terminal domain-like › Siah interacting protein N terminal domain-like › DUF3461 | 0.60 | 42.0 | 3.49e-01 | 74.2% | 52.2% |
| 3480143 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.60 | 47.0 | 3.72e-01 | 93.5% | 59.3% |
| 3983642 | 220.1.1.73 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF3461 | 0.60 | 42.0 | 3.74e-01 | 74.2% | 65.6% |
| 3650282 | 243.5.1.8 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › DUF7074 | 0.60 | 48.0 | 4.41e-01 | 96.8% | 88.8% |
| 3494765 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.59 | 49.0 | 3.43e-01 | 95.2% | 35.9% |
| 3952896 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.59 | 48.0 | 3.92e-01 | 93.5% | 83.9% |
| 4986251 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 44.0 | 3.92e-01 | 100.0% | 56.7% |
| 3682129 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.58 | 51.0 | 3.18e-01 | 100.0% | 70.8% |
| 3444245 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.58 | 47.0 | 4.52e-01 | 95.2% | 100.0% |
| 3715657 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.58 | 47.0 | 4.14e-01 | 95.2% | 61.6% |
| 3970633 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.67e-01 | 88.7% | 86.9% |
| 3226909 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.57 | 41.0 | 3.95e-01 | 80.6% | 64.0% |
| 3276532 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 44.0 | 2.87e-01 | 87.1% | 22.0% |
| 3823475 | 2004.1.1.294 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ELP6 | 0.57 | 49.0 | 3.27e-01 | 98.4% | 87.5% |
| 4027383 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.57 | 48.0 | 2.97e-01 | 95.2% | 94.5% |
| 4942841 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 46.0 | 3.95e-01 | 98.4% | 77.4% |
| 3388747 | 2004.1.1.294 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ELP6 | 0.57 | 48.0 | 3.29e-01 | 98.4% | 90.8% |
| 4011818 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 48.0 | 3.06e-01 | 96.8% | 20.3% |
| 3877571 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 47.0 | 3.87e-01 | 95.2% | 67.0% |
| 3607981 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 43.0 | 4.13e-01 | 87.1% | 82.4% |
| 3945393 | 7089.1.1.2 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 | 0.55 | 40.0 | 3.71e-01 | 83.9% | 61.3% |
| 5004469 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.54 | 46.0 | 3.29e-01 | 100.0% | 30.7% |
| 5079076 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 42.0 | 3.69e-01 | 88.7% | 94.0% |
| 3916009 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 44.0 | 3.25e-01 | 96.8% | 50.0% |
| 3212496 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 41.0 | 3.73e-01 | 87.1% | 97.8% |
| 3441326 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 44.0 | 2.85e-01 | 100.0% | 43.1% |
| 4951886 | 3174.4.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Hypothetical protein NegoA.19184.a N-terminal domain › Hypothetical protein NegoA.19184.a N-terminal domain | 0.54 | 45.0 | 4.11e-01 | 100.0% | 97.8% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 43.0 | 4.19e-01 | 90.3% | 91.4% |
| 3290541 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.53 | 42.0 | 4.21e-01 | 90.3% | 87.7% |
| 4016766 | 10.1.1.7 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_11 | 0.53 | 45.0 | 3.22e-01 | 100.0% | 90.0% |
| 4939745 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 42.0 | 3.00e-01 | 93.5% | 92.7% |
| 3373621 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 38.0 | 3.51e-01 | 77.4% | 88.7% |
| 3470957 | 109.4.1.19 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vitellogenin_N | 0.52 | 43.0 | 2.72e-01 | 96.8% | 22.9% |
| 3791256 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 36.0 | 3.04e-01 | 72.6% | 91.8% |
| 3239567 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 35.0 | 3.00e-01 | 71.0% | 65.7% |
| 3941388 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 37.0 | 2.86e-01 | 77.4% | 55.9% |
| 5082213 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.51 | 42.0 | 3.77e-01 | 95.2% | 84.4% |
| 4466001 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 41.0 | 3.36e-01 | 98.4% | 77.8% |
| 4977196 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.50 | 38.0 | 2.64e-01 | 87.1% | 39.2% |