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IMGVR_UViG_3300010332_000231-3300010332-Ga0116200_100000746
Arc-VirIMGVR_UViG_3300010332_000231-3300010332-Ga0116200_100000746
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 55-159
Domain cluster:
rep: IMGVR_UViG_3300006402_002070-3300006402-Ga0075511_16941613__D3-101
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01841.26 best | Transglut_core | 35.1 | 2.00e-08 | 69.5% | 57.4% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3isrA01 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.87 | 77.0 | 6.25e-01 | 100.0% | 53.0% |
| 3kd4A02 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.73 | 56.0 | 4.83e-01 | 80.0% | 52.5% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.60 | 31.0 | 3.21e-01 | 72.4% | 50.5% |
| 1s7zA01 | 1.20.120.780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr | 0.58 | 43.0 | 4.39e-01 | 78.1% | 92.1% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.58 | 48.0 | 3.55e-01 | 96.2% | 61.8% |
| 4a4aA04 | 1.20.120.670 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › N-acetyl-b-d-glucoasminidase | 0.57 | 39.0 | 2.87e-01 | 71.4% | 38.6% |
| 3iqtA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.54 | 37.0 | 3.64e-01 | 71.4% | 97.4% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.54 | 37.0 | 4.10e-01 | 79.0% | 96.2% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.52 | 37.0 | 3.77e-01 | 99.0% | 75.7% |
| 4eadA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.51 | 29.0 | 2.93e-01 | 74.3% | 50.5% |
| 4htpB00 | 1.10.3260.10 | Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain | 0.51 | 39.0 | 3.18e-01 | 84.8% | 51.4% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4936750 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.93 | 72.0 | 5.84e-01 | 87.6% | 46.7% |
| 5066088 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.92 | 71.0 | 6.11e-01 | 87.6% | 55.3% |
| 5077834 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.89 | 73.0 | 5.16e-01 | 92.4% | 31.8% |
| 4979181 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.89 | 85.0 | 6.78e-01 | 100.0% | 56.8% |
| 5026689 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.87 | 83.0 | 6.60e-01 | 100.0% | 60.0% |
| 5029583 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.87 | 68.0 | 6.01e-01 | 84.8% | 58.6% |
| 5034467 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.87 | 82.0 | 6.24e-01 | 100.0% | 49.3% |
| 3281165 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.86 | 71.0 | 6.30e-01 | 91.4% | 62.8% |
| 5021547 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.86 | 72.0 | 5.57e-01 | 87.6% | 49.0% |
| 4992782 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.86 | 78.0 | 6.50e-01 | 96.2% | 70.0% |
| 3960489 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.85 | 74.0 | 6.29e-01 | 97.1% | 60.0% |
| 5029143 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.85 | 77.0 | 6.53e-01 | 100.0% | 62.5% |
| 3952757 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.85 | 76.0 | 6.32e-01 | 100.0% | 58.2% |
| 4940215 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.84 | 64.0 | 5.10e-01 | 80.0% | 42.6% |
| 3250689 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.84 | 72.0 | 5.84e-01 | 89.5% | 55.0% |
| 5062591 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.84 | 79.0 | 5.38e-01 | 100.0% | 48.5% |
| 4954944 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.84 | 67.0 | 5.80e-01 | 87.6% | 56.8% |
| 4963199 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.83 | 66.0 | 5.57e-01 | 87.6% | 52.7% |
| 4941446 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.83 | 64.0 | 5.03e-01 | 80.0% | 42.5% |
| 5067811 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.83 | 64.0 | 5.12e-01 | 80.0% | 44.2% |
| 5059308 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.82 | 78.0 | 5.74e-01 | 100.0% | 49.8% |
| 5055414 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.82 | 76.0 | 5.92e-01 | 100.0% | 49.8% |
| 3165617 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.82 | 74.0 | 5.84e-01 | 100.0% | 50.0% |
| 5001455 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.82 | 75.0 | 5.94e-01 | 100.0% | 51.0% |
| 4969783 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.82 | 76.0 | 5.24e-01 | 100.0% | 33.6% |
| 4213984 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.82 | 62.0 | 5.07e-01 | 81.0% | 46.9% |
| 5043547 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.81 | 62.0 | 5.35e-01 | 80.0% | 54.2% |
| 4978195 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 75.0 | 6.05e-01 | 100.0% | 56.2% |
| 4951884 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 62.0 | 5.00e-01 | 80.0% | 46.5% |
| 5012995 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.80 | 62.0 | 4.86e-01 | 81.0% | 49.8% |
| 5064712 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.80 | 73.0 | 6.05e-01 | 97.1% | 58.3% |
| 3741085 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.80 | 56.0 | 4.60e-01 | 73.3% | 42.2% |
| 3962783 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.79 | 74.0 | 5.97e-01 | 100.0% | 56.3% |
| 5034224 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.79 | 61.0 | 5.09e-01 | 80.0% | 49.1% |
| 5021112 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 61.0 | 4.88e-01 | 80.0% | 47.4% |
| 4676513 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.78 | 61.0 | 4.98e-01 | 81.0% | 50.0% |
| 4948578 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.78 | 73.0 | 6.47e-01 | 100.0% | 72.4% |
| 5021450 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.77 | 59.0 | 4.74e-01 | 80.0% | 43.7% |
| 4955468 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.76 | 61.0 | 4.92e-01 | 83.8% | 48.7% |
| 5022074 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.76 | 66.0 | 5.23e-01 | 91.4% | 51.0% |
| 146744 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.76 | 57.0 | 4.89e-01 | 80.0% | 51.3% |
| 3604406 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.76 | 59.0 | 4.92e-01 | 81.0% | 50.6% |
| 5029334 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.75 | 57.0 | 4.82e-01 | 80.0% | 51.2% |
| 3786534 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 50.0 | 4.10e-01 | 72.4% | 41.7% |
| 3500153 | 219.1.1.27 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Menin | 0.70 | 56.0 | 4.54e-01 | 85.7% | 56.8% |
| 3484263 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 56.0 | 4.46e-01 | 85.7% | 58.6% |
| 3671563 | 3640.1.1.3 ↗ | alpha duplicates or obligate multimers › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › EDR1 | 0.67 | 55.0 | 4.73e-01 | 88.6% | 89.7% |
| 4425726 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.55 | 35.0 | 3.30e-01 | 82.9% | 50.4% |
| 4068116 | 5060.1.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 | 0.52 | 39.0 | 3.80e-01 | 78.1% | 75.7% |
| 3639271 | 627.1.1.0 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain | 0.50 | 43.0 | 3.58e-01 | 97.1% | 53.5% |
D2
medium
residues 160-252