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IMGVR_UViG_3300010338_000848-3300010338-Ga0116245_1000373011
Arc-VirIMGVR_UViG_3300010338_000848-3300010338-Ga0116245_1000373011
Identity
- Kingdom:
- archaea
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-128
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t07A00 | 1.10.3880.10 | Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX | 0.61 | 31.0 | 3.75e-01 | 88.0% | 74.1% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.58 | 47.0 | 4.99e-01 | 99.2% | 96.4% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 36.0 | 4.01e-01 | 88.0% | 83.0% |
| 3iu6A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.57 | 35.0 | 3.40e-01 | 92.0% | 54.5% |
| 3f0cA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 39.0 | 3.74e-01 | 76.8% | 64.6% |
| 1r6bX03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 34.0 | 3.96e-01 | 93.6% | 90.9% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 27.0 | 3.07e-01 | 100.0% | 64.9% |
| 3vkgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.52 | 45.0 | 4.21e-01 | 95.2% | 77.5% |
| 1jr8A00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.52 | 35.0 | 3.78e-01 | 88.8% | 81.9% |
| 2b3tA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.52 | 29.0 | 3.42e-01 | 88.0% | 81.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4619869 | 148.1.3.351 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Peptidase_U4 | 0.65 | 40.0 | 4.46e-01 | 74.4% | 78.0% |
| 3949317 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.60 | 44.0 | 4.83e-01 | 76.8% | 99.0% |
| 3976621 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.59 | 49.0 | 5.21e-01 | 92.8% | 98.2% |
| 3590171 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.58 | 46.0 | 4.99e-01 | 96.8% | 100.0% |
| 3590722 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.57 | 46.0 | 4.89e-01 | 88.0% | 98.2% |
| 3975629 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.54 | 44.0 | 4.69e-01 | 95.2% | 100.0% |
| 3540152 | 509.1.1.8 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › ZSWIM4-8_C | 0.53 | 31.0 | 3.27e-01 | 76.0% | 63.2% |
| 3848246 | 109.12.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › ZSWIM4-8_C | 0.52 | 32.0 | 3.31e-01 | 71.2% | 65.2% |