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IMGVR_UViG_3300010338_000848-3300010338-Ga0116245_100037306
Arc-VirIMGVR_UViG_3300010338_000848-3300010338-Ga0116245_100037306
Identity
- Kingdom:
- archaea
Quality
79.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 101-189
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_0-10091_curated_closed_complete_start-adj_prodigal-single.1__X__X__00801__D451-513
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 65.0 | 6.47e-01 | 98.9% | 89.1% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 65.0 | 6.02e-01 | 98.9% | 78.9% |
| 3kq4B02 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.65 | 50.0 | 4.61e-01 | 83.1% | 89.8% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.65 | 49.0 | 4.58e-01 | 82.0% | 89.3% |
| 4lorA03 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.64 | 50.0 | 4.59e-01 | 85.4% | 91.6% |
| 3abgB03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.63 | 48.0 | 3.80e-01 | 82.0% | 53.2% |
| 6fzvD01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.62 | 50.0 | 4.64e-01 | 91.0% | 92.4% |
| 4bxsV03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.62 | 48.0 | 3.26e-01 | 85.4% | 68.4% |
| 6xizA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.61 | 48.0 | 4.02e-01 | 86.5% | 63.4% |
| 2aanA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.60 | 46.0 | 4.15e-01 | 82.0% | 77.2% |
| 1ibyA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.60 | 46.0 | 4.32e-01 | 83.1% | 75.9% |
| 3zx1A01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.60 | 49.0 | 4.11e-01 | 91.0% | 65.0% |
| 2m71A00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.59 | 45.0 | 4.43e-01 | 82.0% | 87.8% |
| 5lwxA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 45.0 | 3.47e-01 | 83.1% | 64.5% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 46.0 | 3.72e-01 | 85.4% | 85.1% |
| 3t9wA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.58 | 45.0 | 3.95e-01 | 84.3% | 72.7% |
| 1a4aA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.57 | 44.0 | 4.01e-01 | 85.4% | 79.1% |
| 2r7eB01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.57 | 44.0 | 3.55e-01 | 84.3% | 71.0% |
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.57 | 30.0 | 3.04e-01 | 100.0% | 51.1% |
| 2dv6A01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 43.0 | 4.04e-01 | 83.1% | 69.9% |
| 6syyA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 46.0 | 4.06e-01 | 92.1% | 71.7% |
| 2uxtA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 43.0 | 3.86e-01 | 83.1% | 70.6% |
| 1kzqA01 | 2.60.40.1320 | Mainly Beta › Sandwich › Immunoglobulin-like › SRS domain | 0.55 | 41.0 | 3.72e-01 | 82.0% | 97.7% |
| 5zl1A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 44.0 | 3.14e-01 | 91.0% | 36.3% |
| 4knuA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.54 | 40.0 | 3.45e-01 | 82.0% | 86.2% |
| 4q66A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.41e-01 | 73.0% | 66.3% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 42.0 | 3.85e-01 | 91.0% | 80.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185692 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.72 | 65.0 | 6.02e-01 | 98.9% | 78.9% |
| 3217412 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.66 | 50.0 | 4.63e-01 | 83.1% | 92.4% |
| 4937676 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.66 | 43.0 | 4.46e-01 | 82.0% | 71.1% |
| 3519196 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 49.0 | 4.57e-01 | 82.0% | 81.8% |
| 3510362 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.64 | 49.0 | 4.71e-01 | 84.3% | 93.3% |
| 3474916 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.63 | 51.0 | 4.58e-01 | 88.8% | 88.0% |
| 3966955 | 3156.1.1.8 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2 | 0.62 | 48.0 | 4.09e-01 | 83.1% | 75.2% |
| 3731316 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 47.0 | 4.48e-01 | 84.3% | 91.8% |
| 5039325 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.61 | 47.0 | 4.11e-01 | 82.0% | 59.3% |
| 3969978 | 3156.1.1.9 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 | 0.60 | 49.0 | 4.39e-01 | 89.9% | 73.8% |
| 1169983 | 3156.1.1.9 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 | 0.60 | 49.0 | 4.05e-01 | 91.0% | 62.3% |
| 3916660 | 10.4.1.22 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_CDCP1_2 | 0.58 | 46.0 | 4.05e-01 | 84.3% | 78.5% |
| 4146963 | 3156.1.1.4 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase | 0.58 | 44.0 | 3.23e-01 | 82.0% | 68.6% |
| 3974327 | 3156.1.1.3 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Copper-bind | 0.57 | 43.0 | 3.70e-01 | 83.1% | 77.3% |
| 4937997 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.57 | 42.0 | 4.40e-01 | 79.8% | 96.2% |
| 3507757 | 11.1.1.385 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASH | 0.55 | 42.0 | 3.79e-01 | 82.0% | 60.8% |
| 1820 | 3156.3.1.1 ↗ | beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family › SAG | 0.55 | 41.0 | 3.72e-01 | 82.0% | 97.7% |
| 3253316 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 4.20e-01 | 84.3% | 80.0% |
| 4981578 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 42.0 | 4.04e-01 | 91.0% | 76.2% |
D2
medium
residues 30-80