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IMGVR_UViG_3300010338_002029-3300010338-Ga0116245_1001748711
Arc-VirIMGVR_UViG_3300010338_002029-3300010338-Ga0116245_1001748711
Identity
- Kingdom:
- archaea
Quality
78.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-52
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nivC02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.70 | 48.0 | 3.53e-01 | 72.3% | 29.0% |
| 3h0dB02 | 1.10.1200.150 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain | 0.68 | 53.0 | 4.47e-01 | 87.2% | 69.1% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.68 | 51.0 | 4.33e-01 | 100.0% | 46.2% |
| 6d2qA02 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.68 | 55.0 | 4.46e-01 | 100.0% | 46.2% |
| 1miwA03 | 1.20.58.560 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 56.0 | 4.52e-01 | 100.0% | 69.0% |
| 8e9gE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.66 | 51.0 | 4.77e-01 | 91.5% | 79.4% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.65 | 54.0 | 4.73e-01 | 95.7% | 76.4% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.63 | 50.0 | 4.42e-01 | 95.7% | 68.8% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.62 | 46.0 | 4.79e-01 | 97.9% | 100.0% |
| 7ar7E01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.62 | 47.0 | 4.39e-01 | 87.2% | 82.5% |
| 4pswA03 | 1.10.10.390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 51.0 | 4.94e-01 | 100.0% | 94.4% |
| 2yzvA00 | 1.10.4080.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 | 0.62 | 46.0 | 2.92e-01 | 93.6% | 14.7% |
| 1v4aA03 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.61 | 50.0 | 3.63e-01 | 97.9% | 47.7% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.08e-01 | 100.0% | 61.6% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 47.0 | 4.36e-01 | 100.0% | 66.2% |
| 1gd8A00 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.60 | 49.0 | 3.93e-01 | 100.0% | 57.1% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 45.0 | 4.51e-01 | 100.0% | 93.6% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 43.0 | 3.91e-01 | 100.0% | 55.3% |
| 1o67C00 | 2.40.33.20 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.59 | 42.0 | 2.79e-01 | 97.9% | 17.6% |
| 2djoA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 46.0 | 3.91e-01 | 100.0% | 50.6% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.58 | 41.0 | 3.39e-01 | 74.5% | 52.9% |
| 2ys9A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 42.0 | 3.92e-01 | 100.0% | 60.0% |
| 1akhB00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 46.0 | 4.08e-01 | 100.0% | 60.3% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 43.0 | 4.00e-01 | 97.9% | 62.0% |
| 5ekaA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.57 | 38.0 | 3.25e-01 | 70.2% | 37.6% |
| 2ecbA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 44.0 | 4.36e-01 | 100.0% | 88.2% |
| 2qltA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 45.0 | 4.24e-01 | 100.0% | 88.7% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.55 | 45.0 | 3.48e-01 | 100.0% | 76.6% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 41.0 | 3.68e-01 | 100.0% | 67.9% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5046694 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 57.0 | 5.49e-01 | 100.0% | 81.8% |
| 5022793 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 53.0 | 5.04e-01 | 100.0% | 83.3% |
| 4494528 | 632.2.1.40 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF515 | 0.65 | 46.0 | 4.42e-01 | 72.3% | 65.5% |
| 4998572 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 51.0 | 4.45e-01 | 100.0% | 54.1% |
| 3243493 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 50.0 | 4.73e-01 | 100.0% | 73.3% |
| 3200990 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 51.0 | 3.74e-01 | 100.0% | 44.7% |
| 3785841 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 50.0 | 4.34e-01 | 100.0% | 55.3% |
| 1312033 | 101.1.15.3 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › HAT1_C_fung | 0.62 | 51.0 | 4.99e-01 | 100.0% | 98.1% |
| 4939640 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.61 | 49.0 | 4.66e-01 | 100.0% | 78.3% |
| 3244523 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 47.0 | 4.66e-01 | 100.0% | 90.0% |
| 3231899 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.60 | 47.0 | 4.36e-01 | 100.0% | 70.0% |
| 3525151 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 45.0 | 4.63e-01 | 100.0% | 97.8% |
| 4997853 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 46.0 | 4.57e-01 | 100.0% | 90.0% |
| 3243495 | 101.1.1.289 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB | 0.60 | 47.0 | 4.62e-01 | 100.0% | 83.6% |
| 3579029 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.60 | 43.0 | 3.81e-01 | 100.0% | 50.0% |
| 3231816 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.59 | 46.0 | 4.43e-01 | 100.0% | 76.7% |
| 3881453 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.59 | 48.0 | 4.34e-01 | 95.7% | 71.4% |
| 3572716 | 101.1.1.55 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homez | 0.59 | 44.0 | 4.51e-01 | 100.0% | 91.1% |
| 3792126 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.59 | 46.0 | 3.87e-01 | 100.0% | 48.4% |
| 3219861 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.59 | 45.0 | 4.39e-01 | 100.0% | 81.8% |
| 3219862 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 45.0 | 4.23e-01 | 100.0% | 69.2% |
| 3574083 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.59 | 42.0 | 4.28e-01 | 97.9% | 91.1% |
| 3219867 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 45.0 | 3.94e-01 | 100.0% | 52.9% |
| 3560402 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.58 | 45.0 | 4.31e-01 | 100.0% | 73.8% |
| 4928805 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.58 | 46.0 | 4.18e-01 | 100.0% | 62.7% |
| 3768463 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 46.0 | 4.42e-01 | 100.0% | 78.3% |
| 3886164 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.58 | 46.0 | 4.57e-01 | 100.0% | 94.0% |
| 5011414 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.58 | 46.0 | 4.39e-01 | 100.0% | 78.3% |
| 3694221 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.58 | 46.0 | 4.41e-01 | 100.0% | 78.3% |
| 163004 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 43.0 | 4.00e-01 | 97.9% | 62.0% |
| 4213222 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 45.0 | 4.27e-01 | 100.0% | 73.4% |
| 3240028 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 46.0 | 4.46e-01 | 100.0% | 83.6% |
| 3480451 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 44.0 | 3.93e-01 | 100.0% | 56.2% |
| 3407657 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 47.0 | 3.82e-01 | 100.0% | 64.0% |
| 3243458 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 45.0 | 4.14e-01 | 100.0% | 72.9% |
| 3535807 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 44.0 | 4.05e-01 | 100.0% | 64.3% |
| 4599923 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 47.0 | 4.24e-01 | 100.0% | 70.0% |
| 3571378 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.56 | 42.0 | 4.32e-01 | 100.0% | 100.0% |
| 3997838 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.56 | 44.0 | 4.15e-01 | 100.0% | 84.6% |
| 4620690 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.56 | 40.0 | 4.04e-01 | 78.7% | 91.1% |
| 3217696 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 44.0 | 4.18e-01 | 100.0% | 76.9% |
| 4586835 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.56 | 44.0 | 4.12e-01 | 100.0% | 72.3% |
| 3227458 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.56 | 43.0 | 4.16e-01 | 95.7% | 90.0% |
| 3513561 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.56 | 45.0 | 4.08e-01 | 97.9% | 84.3% |
| 3493693 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.56 | 46.0 | 4.14e-01 | 100.0% | 74.3% |
| 3243454 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 41.0 | 3.99e-01 | 93.6% | 71.7% |
| None | — | 0.56 | 42.0 | 4.06e-01 | 100.0% | 75.4% | |
| 3218376 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 44.0 | 4.37e-01 | 100.0% | 94.0% |
| 3936240 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.56 | 46.0 | 4.24e-01 | 100.0% | 75.4% |
| 3626749 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.55 | 45.0 | 4.19e-01 | 100.0% | 75.4% |
| 3523991 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.55 | 45.0 | 4.06e-01 | 100.0% | 71.4% |
| 3216569 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.54 | 42.0 | 4.16e-01 | 100.0% | 90.9% |
| 3538312 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.54 | 45.0 | 4.47e-01 | 100.0% | 98.0% |
| 3669646 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.54 | 46.0 | 4.43e-01 | 100.0% | 94.5% |
| 3351064 | 540.1.1.1 ↗ | few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › COX6B | 0.54 | 45.0 | 4.16e-01 | 100.0% | 80.0% |
| 3854655 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.54 | 45.0 | 4.45e-01 | 100.0% | 98.0% |
| 3243507 | 101.1.1.289 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB | 0.54 | 41.0 | 3.89e-01 | 100.0% | 75.4% |
| 3994528 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.54 | 45.0 | 4.22e-01 | 100.0% | 81.7% |
| 3411217 | 101.1.1.319 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding, Myb_DNA-binding_2 | 0.53 | 41.0 | 3.07e-01 | 100.0% | 33.3% |
| 1316682 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.53 | 40.0 | 3.90e-01 | 100.0% | 77.0% |