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IMGVR_UViG_3300010342_001534-3300010342-Ga0116252_100283546
Arc-VirIMGVR_UViG_3300010342_001534-3300010342-Ga0116252_100283546
Identity
- Kingdom:
- archaea
Quality
91.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-104
Domain cluster:
rep: CAKLQF020000013.1__CAH1086907.1__SAMEA5780031_02529__00065__D1-81
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02652.21 best | Lactate_perm | 39.1 | 6.00e-10 | 90.9% | 16.9% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aqlA02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.68 | 51.0 | 3.82e-01 | 79.8% | 62.1% |
| 7qx4A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.64 | 48.0 | 3.63e-01 | 78.8% | 70.5% |
| 1yowA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.62 | 48.0 | 3.73e-01 | 84.8% | 95.2% |
| 3cx3B01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.61 | 48.0 | 4.18e-01 | 84.8% | 72.7% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 42.0 | 4.06e-01 | 84.8% | 64.3% |
| 3rvyA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 41.0 | 4.05e-01 | 80.8% | 65.4% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 40.0 | 4.30e-01 | 78.8% | 81.6% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 37.0 | 3.72e-01 | 80.8% | 62.7% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.58 | 40.0 | 3.77e-01 | 72.7% | 72.0% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 44.0 | 3.87e-01 | 82.8% | 96.7% |
| 1p8dB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 45.0 | 3.45e-01 | 88.9% | 95.4% |
| 1k74D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 45.0 | 3.32e-01 | 88.9% | 93.8% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 39.0 | 3.47e-01 | 74.7% | 93.4% |
| 6a3kA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.55 | 39.0 | 3.55e-01 | 72.7% | 75.2% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 34.0 | 3.63e-01 | 75.8% | 73.2% |
| 1exaA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.54 | 44.0 | 3.37e-01 | 89.9% | 94.5% |
| 4agsB04 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 40.0 | 3.74e-01 | 82.8% | 97.7% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.53 | 36.0 | 3.45e-01 | 70.7% | 71.4% |
| 5n17A01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 37.0 | 3.68e-01 | 73.7% | 73.1% |
| 5n13A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 36.0 | 3.55e-01 | 70.7% | 68.5% |
| 1oshA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 43.0 | 3.43e-01 | 94.9% | 94.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4980272 | 3355.1.1.0 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter | 0.89 | 75.0 | 4.61e-01 | 88.9% | 16.8% |
| 4959752 | 3355.1.1.14 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Lactate_perm | 0.88 | 71.0 | 4.39e-01 | 84.8% | 17.0% |
| 5061183 | 3355.1.1.14 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Lactate_perm | 0.87 | 73.0 | 4.59e-01 | 87.9% | 21.3% |
| 4331902 | 3355.1.1.14 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Lactate_perm | 0.87 | 77.0 | 4.79e-01 | 94.9% | 19.2% |
| 4169832 | 3355.1.1.14 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Lactate_perm | 0.87 | 77.0 | 4.72e-01 | 94.9% | 17.4% |
| 3983640 | 3355.1.1.14 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Lactate_perm | 0.86 | 78.0 | 4.86e-01 | 97.0% | 20.0% |
| 4466218 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.79 | 65.0 | 4.25e-01 | 90.9% | 21.2% |
| 4941712 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.76 | 55.0 | 4.56e-01 | 75.8% | 52.4% |
| 5079301 | 3355.1.1.4 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DctM | 0.76 | 67.0 | 4.41e-01 | 97.0% | 25.6% |
| 4163021 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.68 | 43.0 | 4.38e-01 | 81.8% | 64.0% |
| 3742906 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.68 | 55.0 | 5.03e-01 | 84.8% | 73.6% |
| 3962973 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.67 | 48.0 | 4.32e-01 | 73.7% | 66.7% |
| 3687029 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.67 | 54.0 | 5.54e-01 | 84.8% | 93.7% |
| 3633170 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.67 | 54.0 | 5.03e-01 | 84.8% | 76.7% |
| 4020089 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.66 | 53.0 | 4.72e-01 | 84.8% | 65.7% |
| 4968245 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.65 | 50.0 | 4.00e-01 | 83.8% | 100.0% |
| 4945083 | 7014.1.1.0 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain | 0.64 | 40.0 | 3.86e-01 | 72.7% | 55.5% |
| 3445635 | 3718.1.1.23 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › ALMT | 0.63 | 46.0 | 4.45e-01 | 77.8% | 78.3% |
| 4491397 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.63 | 44.0 | 4.76e-01 | 73.7% | 87.1% |
| 3924719 | 371.1.1.0 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 | 0.62 | 42.0 | 4.28e-01 | 70.7% | 70.5% |
| 5080068 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.59 | 34.0 | 3.45e-01 | 72.7% | 56.0% |
| 1866912 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.58 | 37.0 | 3.74e-01 | 80.8% | 62.7% |
| 3241687 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 47.0 | 4.50e-01 | 89.9% | 98.3% |
| 3856007 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.57 | 46.0 | 3.50e-01 | 89.9% | 89.2% |
| 3404256 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.55 | 40.0 | 4.00e-01 | 74.7% | 84.0% |
| 3289474 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 43.0 | 4.38e-01 | 85.9% | 100.0% |
| 3605285 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.51 | 40.0 | 3.55e-01 | 85.9% | 68.3% |