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IMGVR_UViG_3300010342_001535-3300010342-Ga0116252_1001675912
Arc-VirIMGVR_UViG_3300010342_001535-3300010342-Ga0116252_1001675912
Identity
- Kingdom:
- archaea
Quality
70.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-29
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2psbA00 | 3.50.90.10 | Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like | 0.64 | 47.0 | 2.83e-01 | 100.0% | 20.3% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 37.0 | 2.86e-01 | 100.0% | 43.6% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 38.0 | 2.81e-01 | 96.6% | 20.9% |
| 3mb5A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 2.52e-01 | 100.0% | 24.4% |
| 4l8nA03 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 2.55e-01 | 100.0% | 39.6% |
| 5c0oH00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 36.0 | 2.37e-01 | 100.0% | 14.2% |
| 3bvxA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 36.0 | 2.54e-01 | 86.2% | 27.2% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 33.0 | 1.96e-01 | 100.0% | 72.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616834 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 35.0 | 2.69e-01 | 100.0% | 25.2% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.52 | 38.0 | 2.72e-01 | 100.0% | 22.3% |
| 3208411 | 708.1.2.10 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 | 0.51 | 33.0 | 2.17e-01 | 100.0% | 21.4% |
| 3489808 | 59.1.1.9 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › EAF | 0.51 | 33.0 | 2.95e-01 | 100.0% | 38.6% |
| 5067129 | 2003.1.5.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 | 0.51 | 35.0 | 2.37e-01 | 100.0% | 15.8% |
| 3997327 | 3315.1.1.0 ↗ | a+b complex topology › Insertion domain in O-GlcNAc transferase › Insertion domain in O-GlcNAc transferase › Insertion domain in O-GlcNAc transferase | 0.50 | 34.0 | 2.71e-01 | 89.7% | 34.7% |