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IMGVR_UViG_3300010344_002256-3300010344-Ga0116243_1000936817
Arc-VirIMGVR_UViG_3300010344_002256-3300010344-Ga0116243_1000936817
Identity
- Kingdom:
- archaea
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-86
Domain cluster:
rep: IMGVR_UViG_3300009690_000630-3300009690-Ga0116143_1000481214__D7-97
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.65 | 56.0 | 5.53e-01 | 97.5% | 89.2% |
| 1e7lA01 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.63 | 48.0 | 4.88e-01 | 88.7% | 82.5% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 35.0 | 3.51e-01 | 86.3% | 58.7% |
| 2y43A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 33.0 | 3.24e-01 | 86.3% | 52.3% |
| 2iqjB00 | 1.10.220.150 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Arf GTPase activating protein | 0.51 | 45.0 | 3.95e-01 | 100.0% | 91.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937899 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.87 | 61.0 | 5.83e-01 | 73.8% | 64.4% |
| 3277754 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.80 | 62.0 | 6.56e-01 | 98.8% | 92.9% |
| 5080395 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.80 | 71.0 | 6.21e-01 | 100.0% | 66.1% |
| 3963335 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.79 | 65.0 | 5.47e-01 | 100.0% | 54.3% |
| 3950953 | 377.1.1.78 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH_5 | 0.79 | 61.0 | 6.53e-01 | 98.8% | 94.3% |
| 3952818 | 378.1.1.27 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 | 0.78 | 61.0 | 6.37e-01 | 98.8% | 89.2% |
| 4932123 | 377.7.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › HNH | 0.78 | 62.0 | 6.61e-01 | 98.8% | 97.1% |
| 2036620 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.78 | 63.0 | 6.03e-01 | 90.0% | 75.0% |
| 4404465 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.77 | 59.0 | 6.53e-01 | 100.0% | 100.0% |
| 3952776 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.76 | 56.0 | 6.20e-01 | 92.5% | 95.4% |
| 3588377 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.76 | 63.0 | 5.82e-01 | 87.5% | 74.0% |
| 5070853 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.75 | 61.0 | 5.97e-01 | 98.8% | 81.2% |
| 3839237 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.73 | 66.0 | 5.13e-01 | 100.0% | 49.4% |
| 5073918 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.72 | 65.0 | 6.11e-01 | 100.0% | 83.2% |
| 4999440 | 378.1.1.27 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 | 0.71 | 61.0 | 5.99e-01 | 100.0% | 87.1% |
| 3948700 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.71 | 67.0 | 5.63e-01 | 100.0% | 91.9% |
| 3199415 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.70 | 64.0 | 4.49e-01 | 100.0% | 49.6% |
| 2485694 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.69 | 64.0 | 5.29e-01 | 100.0% | 59.7% |
| 4021854 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.69 | 61.0 | 4.61e-01 | 96.2% | 56.4% |
| 5019258 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.68 | 59.0 | 5.94e-01 | 98.8% | 93.8% |
| 3587782 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.67 | 61.0 | 5.42e-01 | 97.5% | 78.2% |
| 3208720 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.67 | 60.0 | 5.16e-01 | 96.2% | 73.0% |
| 4964156 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.67 | 61.0 | 5.37e-01 | 100.0% | 80.0% |
| 3440476 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.67 | 61.0 | 5.25e-01 | 98.8% | 69.7% |
| 3978374 | 378.1.1.18 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF968 | 0.64 | 54.0 | 5.35e-01 | 100.0% | 88.2% |
| 3392084 | 386.1.1.25 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_5 | 0.58 | 23.0 | 3.22e-01 | 73.8% | 86.7% |
| 3391017 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.54 | 27.0 | 3.35e-01 | 82.5% | 82.2% |
| 4882574 | 375.1.1.35 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_2753_ZBP | 0.53 | 33.0 | 3.69e-01 | 88.7% | 86.2% |
| 3958563 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.52 | 43.0 | 3.19e-01 | 96.2% | 87.0% |
| 3701855 | 375.1.1.77 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 | 0.52 | 23.0 | 3.18e-01 | 70.0% | 100.0% |
| 3215898 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 26.0 | 2.97e-01 | 93.8% | 63.6% |