Back to structures

IMGVR_UViG_3300010346_002051-3300010346-Ga0116239_100187222

Arc-Vir

IMGVR_UViG_3300010346_002051-3300010346-Ga0116239_100187222

Quality

69.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-51
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3no6A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.76 55.0 3.46e-01 78.3% 16.2%
4fqnC00 1.20.1160.20 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › 0.71 61.0 5.04e-01 100.0% 55.3%
2y4tA02 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.68 48.0 4.75e-01 80.4% 86.5%
3qxzA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.65 48.0 4.47e-01 82.6% 75.0%
6e6oA00 1.20.50.10 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › Pheromone ER-1 0.63 41.0 4.26e-01 80.4% 77.5%
4jbeB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.61 52.0 3.28e-01 100.0% 74.6%
5jnmA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.59 49.0 3.43e-01 100.0% 39.1%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.27e-01 100.0% 74.6%
3c1dA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.99e-01 100.0% 97.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033902 4146.1.1.1 alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › YqgQ-like 0.89 67.0 6.06e-01 80.4% 63.3%
3842812 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.86 64.0 4.06e-01 80.4% 18.1%
3527376 6051.7.1.0 alpha duplicates or obligate multimers › Docking domains in modular polyketide synthases › Class 4 C-terminal docking domain › Class 4 C-terminal docking domain 0.77 55.0 6.11e-01 76.1% 100.0%
4520075 7510.1.1.3 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › FA_synthesis 0.76 56.0 3.76e-01 80.4% 22.3%
4124570 1054.1.1.1 alpha bundles › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arg_decarbox_C 0.71 51.0 5.20e-01 78.3% 82.2%
3764064 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.63 45.0 3.81e-01 78.3% 61.2%
3643105 6026.1.1.1 alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21 0.60 44.0 3.02e-01 78.3% 31.6%
3994704 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 47.0 4.22e-01 95.7% 81.5%
2647290 225.1.1.6 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2 0.52 38.0 3.28e-01 82.6% 57.5%
D2 high residues 119-186
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 50.0 5.31e-01 79.4% 100.0%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.67 50.0 5.28e-01 89.7% 91.5%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 5.32e-01 76.5% 100.0%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 49.0 5.06e-01 79.4% 87.7%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 5.05e-01 80.9% 100.0%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.66 49.0 5.27e-01 94.1% 93.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 46.0 4.83e-01 83.8% 83.3%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 5.08e-01 89.7% 76.6%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.07e-01 85.3% 50.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 52.0 5.25e-01 86.8% 91.2%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 49.0 5.22e-01 80.9% 100.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 5.39e-01 89.7% 92.3%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 5.13e-01 88.2% 97.2%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 48.0 5.13e-01 79.4% 100.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 47.0 4.78e-01 89.7% 81.8%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 49.0 4.69e-01 82.4% 87.2%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 49.0 5.15e-01 80.9% 96.7%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 48.0 5.11e-01 80.9% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.64e-01 85.3% 79.7%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 5.39e-01 92.6% 98.4%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 46.0 4.69e-01 79.4% 100.0%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 51.0 4.75e-01 91.2% 82.1%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 47.0 4.86e-01 82.4% 96.9%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 44.0 4.77e-01 77.9% 100.0%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 50.0 4.41e-01 88.2% 63.3%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 45.0 4.70e-01 86.8% 91.7%
7r3mA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 4.81e-01 94.1% 90.2%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 46.0 4.88e-01 80.9% 100.0%
3e19B01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.60 47.0 4.84e-01 85.3% 100.0%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 4.09e-01 85.3% 61.1%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 45.0 3.22e-01 82.4% 31.4%
2creA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 50.0 5.01e-01 97.1% 100.0%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 47.0 4.48e-01 89.7% 90.4%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 48.0 4.74e-01 92.6% 96.0%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 47.0 4.84e-01 86.8% 100.0%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 45.0 4.70e-01 83.8% 100.0%
3wkmB01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.58 47.0 4.29e-01 91.2% 96.8%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.58 47.0 4.39e-01 89.7% 81.4%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 3.89e-01 85.3% 62.5%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 45.0 4.63e-01 82.4% 89.2%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 43.0 3.30e-01 80.9% 64.6%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 4.04e-01 85.3% 61.5%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 48.0 4.67e-01 97.1% 89.5%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.57 46.0 4.51e-01 91.2% 89.5%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 38.0 3.36e-01 91.2% 44.3%
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 45.0 3.35e-01 88.2% 82.5%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 43.0 4.41e-01 86.8% 94.0%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 45.0 4.70e-01 89.7% 100.0%
2dlpA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 49.0 4.61e-01 100.0% 82.4%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.56 44.0 4.33e-01 86.8% 93.2%
2jaeA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 42.0 3.12e-01 82.4% 61.6%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.55 43.0 4.25e-01 89.7% 80.3%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 37.0 3.22e-01 91.2% 43.1%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.55 44.0 4.29e-01 91.2% 88.2%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.54 42.0 4.16e-01 89.7% 88.2%
2q5fA02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.54 42.0 3.51e-01 89.7% 78.4%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 43.0 3.63e-01 89.7% 99.2%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 41.0 4.34e-01 85.3% 100.0%
3oc4B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 2.93e-01 82.4% 81.9%
2daqA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 46.0 3.92e-01 100.0% 92.7%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4640515 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.78 51.0 5.91e-01 83.8% 92.0%
4369736 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.78 49.0 5.88e-01 86.8% 97.8%
3990857 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 56.0 5.94e-01 83.8% 86.7%
4585317 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.75 51.0 5.62e-01 83.8% 87.3%
3436022 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.73 51.0 5.53e-01 89.7% 89.1%
3991244 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.73 47.0 5.64e-01 77.9% 100.0%
4467360 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.68e-01 80.9% 88.3%
5029655 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 54.0 5.69e-01 83.8% 90.0%
3925408 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.66e-01 80.9% 100.0%
3407841 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.08e-01 77.9% 88.0%
4644007 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.71 54.0 5.83e-01 85.3% 93.2%
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 51.0 5.07e-01 85.3% 72.9%
3581968 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 4.56e-01 91.2% 51.4%
4138563 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.44e-01 85.3% 84.6%
4354770 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.69 54.0 5.38e-01 86.8% 80.0%
5035447 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.44e-01 85.3% 86.2%
3604145 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 47.0 4.97e-01 82.4% 83.3%
3502388 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 49.0 4.77e-01 82.4% 69.3%
4973749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 47.0 4.75e-01 85.3% 72.9%
3886646 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 52.0 5.38e-01 83.8% 92.3%
3503782 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 51.0 5.36e-01 80.9% 96.7%
3523030 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 50.0 5.13e-01 80.9% 100.0%
4119802 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 53.0 5.42e-01 85.3% 95.4%
3519861 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 49.0 5.17e-01 82.4% 88.3%
3259043 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 53.0 5.29e-01 86.8% 92.9%
3490689 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 53.0 5.25e-01 85.3% 87.1%
3844839 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.76e-01 92.6% 88.2%
5058103 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.48e-01 89.7% 88.2%
3524378 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 50.0 5.27e-01 80.9% 100.0%
4367301 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 50.0 5.41e-01 89.7% 100.0%
3517456 4.1.1.334 beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.66 50.0 4.89e-01 82.4% 100.0%
3924337 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 50.0 5.24e-01 80.9% 100.0%
1263753 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 49.0 5.22e-01 80.9% 100.0%
4091379 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 52.0 5.22e-01 85.3% 87.1%
3484084 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.71e-01 88.2% 73.7%
3713613 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 50.0 5.14e-01 82.4% 95.4%
3389584 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.87e-01 88.2% 84.7%
3763060 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 52.0 5.22e-01 88.2% 98.6%
3898363 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 53.0 5.26e-01 89.7% 88.6%
3505711 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.64 51.0 4.78e-01 86.8% 69.4%
3919980 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 53.0 5.42e-01 91.2% 98.5%
3885695 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 51.0 4.83e-01 86.8% 77.5%
3507338 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 48.0 5.10e-01 89.7% 91.7%
3522718 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 46.0 4.92e-01 77.9% 100.0%
3391702 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 48.0 4.59e-01 82.4% 73.8%
3914346 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 55.0 5.01e-01 95.6% 78.9%
3883895 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 51.0 4.49e-01 88.2% 70.0%
2121553 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 49.0 4.87e-01 83.8% 90.0%
3543889 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 50.0 3.06e-01 86.8% 15.0%
4483819 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 50.0 5.00e-01 86.8% 87.1%
3539147 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 5.06e-01 86.8% 85.7%
3585447 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 50.0 4.77e-01 86.8% 75.0%
3904253 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 50.0 5.12e-01 88.2% 98.5%
3914833 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 47.0 4.70e-01 80.9% 85.7%
436188 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 47.0 4.80e-01 82.4% 92.5%
4953054 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.34e-01 86.8% 69.3%
3487686 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.86e-01 94.1% 96.5%
5078178 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.62 48.0 4.68e-01 85.3% 90.7%
3399284 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 50.0 5.09e-01 88.2% 93.8%
3769245 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 53.0 5.23e-01 100.0% 94.7%
3526950 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 49.0 5.19e-01 86.8% 100.0%
162441 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 49.0 4.84e-01 86.8% 91.5%
3217112 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 48.0 4.78e-01 85.3% 84.3%
5022745 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.36e-01 91.2% 79.0%
5020812 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 47.0 4.56e-01 83.8% 86.7%
4947702 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.53e-01 83.8% 90.7%
3554994 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 52.0 4.78e-01 95.6% 74.2%
3931418 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 48.0 5.09e-01 86.8% 100.0%
3876823 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 47.0 4.63e-01 85.3% 80.0%
3906249 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 53.0 5.22e-01 100.0% 100.0%
4033110 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.60 46.0 4.55e-01 85.3% 90.7%
3231675 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 49.0 4.90e-01 89.7% 92.9%
3267416 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 50.0 4.75e-01 92.6% 83.7%
3470265 101.1.9.114 alpha arrays › HTH › HTH › Putative DNA-binding domain › Prefoldin_2 0.60 38.0 3.93e-01 89.7% 66.2%
3516244 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 48.0 4.61e-01 88.2% 75.0%
4610859 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 47.0 4.78e-01 85.3% 90.8%
3888226 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 48.0 4.70e-01 89.7% 88.0%
162115 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 50.0 5.03e-01 95.6% 97.1%
3599257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 50.0 5.10e-01 94.1% 98.5%
3503884 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.59 48.0 3.81e-01 89.7% 85.0%
5063688 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.58 46.0 4.31e-01 89.7% 76.4%
3808578 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 38.0 3.78e-01 86.8% 63.5%
4017372 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.56 37.0 3.21e-01 91.2% 40.9%
3579472 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.54 36.0 3.00e-01 91.2% 36.2%
3593339 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.54 36.0 3.11e-01 91.2% 40.9%
3712081 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.54 36.0 3.15e-01 91.2% 42.7%
3304610 10.13.1.0 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.54 42.0 3.23e-01 92.6% 87.9%
3706106 10.13.1.1 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.54 44.0 3.36e-01 98.5% 92.6%
3829807 4.18.1.1 beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.53 45.0 3.62e-01 94.1% 80.7%
3920897 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.53 46.0 4.50e-01 100.0% 93.3%
3468943 10.13.1.0 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.52 42.0 3.23e-01 98.5% 91.3%
3550136 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.51 38.0 3.20e-01 91.2% 46.1%
3209967 10.13.1.0 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.51 42.0 3.23e-01 98.5% 82.7%
D3 high residues 190-250
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.74 56.0 5.19e-01 96.7% 64.9%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 5.08e-01 98.4% 73.2%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.67 53.0 3.91e-01 98.4% 31.1%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 58.0 5.65e-01 98.4% 93.9%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 4.53e-01 96.7% 62.8%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.64 42.0 4.07e-01 72.1% 61.2%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 5.56e-01 98.4% 95.3%
3plsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 44.0 3.78e-01 75.4% 89.4%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 43.0 3.59e-01 72.1% 74.0%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 46.0 4.61e-01 78.7% 85.2%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 39.0 4.26e-01 72.1% 79.6%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 4.96e-01 96.7% 87.5%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.61 54.0 5.35e-01 98.4% 93.7%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 51.0 3.32e-01 95.1% 72.9%
1amiA04 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.60 47.0 3.32e-01 90.2% 81.9%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.60 50.0 4.42e-01 96.7% 68.8%
5mteA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.60 48.0 3.77e-01 91.8% 82.5%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.58 37.0 2.17e-01 91.8% 7.4%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 2.84e-01 88.5% 39.8%
2jh1A01 3.90.640.70 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.58 41.0 3.46e-01 77.0% 63.0%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 3.53e-01 85.2% 76.5%
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 3.85e-01 80.3% 91.6%
1ik3A04 3.10.450.60 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 46.0 3.62e-01 90.2% 70.9%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 3.09e-01 88.5% 87.3%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 45.0 3.72e-01 91.8% 97.5%
4fxdA05 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.55 43.0 3.60e-01 90.2% 88.9%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.55 47.0 2.83e-01 98.4% 33.9%
3itwA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.55 34.0 3.60e-01 82.0% 67.9%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 43.0 4.16e-01 88.5% 76.1%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 44.0 2.81e-01 91.8% 28.0%
2jzkA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.54 44.0 3.75e-01 91.8% 79.6%
1i1nA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 38.0 2.60e-01 73.8% 84.4%
2ojhA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 46.0 2.99e-01 96.7% 28.2%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.54 40.0 2.97e-01 82.0% 45.7%
6cxhA03 2.60.40.1580 Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 0.54 39.0 3.14e-01 80.3% 91.9%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.54 40.0 2.76e-01 83.6% 38.2%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 41.0 3.50e-01 86.9% 83.2%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.52 42.0 3.58e-01 91.8% 76.9%
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.52 43.0 3.56e-01 91.8% 79.3%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.52 38.0 3.86e-01 90.2% 79.4%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 42.0 3.70e-01 96.7% 61.5%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.51 41.0 3.33e-01 96.7% 69.3%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.51 35.0 3.05e-01 73.8% 48.5%
4a27A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 38.0 2.98e-01 86.9% 82.3%
2zutA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 36.0 3.67e-01 93.4% 79.7%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924377 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 57.0 5.99e-01 98.4% 94.5%
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 54.0 5.71e-01 95.1% 89.1%
3583296 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 63.0 6.00e-01 98.4% 91.4%
3926120 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.69 57.0 4.32e-01 96.7% 37.9%
3991896 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 62.0 5.26e-01 98.4% 67.4%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.63e-01 96.7% 91.4%
3969959 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 62.0 5.41e-01 100.0% 77.8%
3787441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 61.0 5.34e-01 100.0% 70.0%
3623785 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 60.0 5.61e-01 100.0% 84.0%
3482680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.66e-01 96.7% 93.8%
4218488 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 58.0 5.32e-01 98.4% 77.5%
3989574 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 50.0 4.58e-01 96.7% 61.2%
3479042 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 58.0 5.58e-01 100.0% 90.0%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 56.0 5.36e-01 95.1% 88.6%
3566631 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 57.0 5.23e-01 98.4% 77.5%
3482646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 58.0 4.00e-01 100.0% 31.5%
3210707 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 54.0 5.52e-01 93.4% 98.3%
3480200 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 57.0 5.33e-01 98.4% 100.0%
3926118 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.64 52.0 5.27e-01 96.7% 91.7%
157526 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 56.0 5.57e-01 98.4% 98.4%
3507639 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.64 51.0 4.93e-01 98.4% 80.0%
157624 4.1.1.47 beta barrels › SH3 › SH3 › SH3 › Gemin6 0.64 50.0 4.53e-01 96.7% 62.8%
3631298 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 55.0 5.20e-01 98.4% 82.7%
3928430 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.63 52.0 5.04e-01 96.7% 81.4%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 52.0 4.76e-01 96.7% 71.2%
4377781 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 51.0 4.75e-01 98.4% 78.8%
3959531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.47e-01 96.7% 77.1%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 48.0 4.92e-01 90.2% 98.3%
164415 3083.1.1.1 beta barrels › Micronemal adhesive repeat › Micronemal adhesive repeat › Micronemal adhesive repeat › MAR_sialic_bdg 0.58 41.0 3.38e-01 77.0% 58.6%
3907176 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.58 50.0 4.40e-01 98.4% 74.4%
4232558 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.57 38.0 3.24e-01 70.5% 41.0%
4072334 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.57 39.0 3.34e-01 72.1% 45.0%
4931822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.15e-01 95.1% 75.4%
5068231 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 47.0 4.48e-01 96.7% 88.0%
4031151 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.56 45.0 4.32e-01 93.4% 80.0%
3192398 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 49.0 2.88e-01 100.0% 30.1%
4502878 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.55 39.0 3.94e-01 85.2% 76.7%
4984563 1.1.2.16 beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD 0.54 46.0 3.69e-01 98.4% 80.8%
1144799 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 47.0 3.52e-01 100.0% 96.9%
4108633 11.1.1.608 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail 0.53 39.0 3.76e-01 78.7% 87.1%
3240511 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.53 44.0 3.73e-01 95.1% 57.1%
4060677 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 35.0 3.16e-01 70.5% 76.7%
4435672 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 36.0 3.62e-01 82.0% 69.2%
4015423 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.52 42.0 2.65e-01 90.2% 29.9%
4119875 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 36.0 3.59e-01 82.0% 69.2%
3255946 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.89e-01 93.4% 76.2%
3271244 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.48e-01 82.0% 76.7%
4930386 11.1.1.1395 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HcyBio 0.51 42.0 3.72e-01 100.0% 76.0%
4456732 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.50 36.0 3.30e-01 82.0% 57.5%
4028996 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 39.0 3.12e-01 91.8% 45.5%