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IMGVR_UViG_3300010346_002216-3300010346-Ga0116239_100382466

Arc-Vir

IMGVR_UViG_3300010346_002216-3300010346-Ga0116239_100382466

Quality

77.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-59
PDB
Domain cluster: representative
D2 high residues 72-118
PDB
Domain cluster: representative
CATH (93)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.97 69.0 6.53e-01 76.6% 64.8%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.95 71.0 6.70e-01 85.1% 67.3%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.95 71.0 7.27e-01 85.1% 82.2%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 68.0 6.65e-01 85.1% 72.5%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 76.0 7.12e-01 91.5% 75.0%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.91 72.0 6.74e-01 87.2% 71.4%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 82.0 7.37e-01 100.0% 74.6%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 74.0 6.87e-01 91.5% 72.4%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.88 73.0 4.64e-01 91.5% 20.4%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.88 81.0 5.59e-01 100.0% 33.8%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 72.0 6.61e-01 91.5% 72.1%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.87 77.0 6.08e-01 100.0% 50.0%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 73.0 7.19e-01 93.6% 87.8%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 73.0 6.14e-01 91.5% 57.3%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 73.0 5.99e-01 91.5% 53.8%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 76.0 6.84e-01 100.0% 73.8%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 72.0 6.14e-01 91.5% 59.7%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.85 76.0 4.71e-01 100.0% 18.4%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 77.0 5.84e-01 100.0% 44.8%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.85 70.0 4.98e-01 89.4% 32.8%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 72.0 6.59e-01 93.6% 73.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 71.0 5.71e-01 91.5% 49.4%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 65.0 5.99e-01 83.0% 67.8%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 68.0 5.55e-01 91.5% 49.4%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 72.0 6.85e-01 93.6% 83.3%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 74.0 6.69e-01 100.0% 73.4%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 68.0 6.03e-01 89.4% 63.6%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 73.0 6.53e-01 95.7% 82.5%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 68.0 6.13e-01 89.4% 66.7%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.82 69.0 4.91e-01 95.7% 31.9%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 6.03e-01 89.4% 68.3%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 64.0 6.54e-01 89.4% 90.9%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 71.0 6.27e-01 95.7% 70.1%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 70.0 6.84e-01 95.7% 88.5%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 6.57e-01 95.7% 87.9%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 6.40e-01 95.7% 96.8%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.57e-01 93.6% 81.8%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 5.96e-01 89.4% 67.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.81 68.0 5.22e-01 93.6% 46.6%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 60.0 6.41e-01 85.1% 92.7%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 5.24e-01 91.5% 47.2%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 4.55e-01 87.2% 31.8%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 6.62e-01 95.7% 85.2%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 6.71e-01 95.7% 86.5%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 5.74e-01 89.4% 64.2%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 68.0 6.74e-01 95.7% 90.0%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.55e-01 89.4% 59.7%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.57e-01 89.4% 65.3%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.56e-01 89.4% 67.6%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 57.0 4.77e-01 76.6% 47.4%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 5.76e-01 100.0% 66.3%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.70e-01 95.7% 61.8%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 5.25e-01 91.5% 50.0%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 6.22e-01 80.9% 100.0%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 4.35e-01 87.2% 29.6%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.78 59.0 4.19e-01 85.1% 27.5%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 4.39e-01 89.4% 30.3%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 4.37e-01 89.4% 28.5%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 5.32e-01 89.4% 65.4%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 69.0 6.17e-01 100.0% 77.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 68.0 5.18e-01 95.7% 69.2%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.78 67.0 4.95e-01 100.0% 49.6%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 5.51e-01 89.4% 67.6%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.77 60.0 4.62e-01 89.4% 37.6%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.26e-01 89.4% 55.1%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 4.39e-01 89.4% 31.2%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 4.81e-01 95.7% 41.9%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 6.45e-01 95.7% 90.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 4.47e-01 89.4% 34.9%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 4.17e-01 87.2% 28.8%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.76 61.0 4.82e-01 93.6% 43.3%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 4.36e-01 89.4% 30.7%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.76 54.0 5.45e-01 80.9% 78.3%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 4.46e-01 95.7% 41.2%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 52.0 5.33e-01 72.3% 89.1%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 6.06e-01 93.6% 86.5%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 4.66e-01 95.7% 46.5%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 54.0 4.85e-01 76.6% 55.4%
4fx0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 4.24e-01 89.4% 32.0%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.04e-01 89.4% 68.8%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 53.0 4.67e-01 74.5% 54.5%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 4.08e-01 89.4% 28.5%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 4.29e-01 95.7% 42.0%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 4.86e-01 76.6% 62.1%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 4.46e-01 95.7% 45.2%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 50.0 5.09e-01 76.6% 78.7%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.26e-01 95.7% 41.0%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.17e-01 95.7% 88.4%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.69 50.0 5.20e-01 80.9% 92.7%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 49.0 4.46e-01 76.6% 61.5%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.70e-01 100.0% 61.6%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 50.0 4.52e-01 80.9% 64.1%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 49.0 4.08e-01 97.9% 97.7%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.97 75.0 7.03e-01 85.1% 69.1%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.96 79.0 7.18e-01 89.4% 68.3%
3954433 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.94 72.0 7.44e-01 85.1% 84.4%
3971860 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 79.0 7.72e-01 91.5% 86.0%
3401087 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.93 72.0 7.11e-01 87.2% 78.0%
4393383 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.92 70.0 7.53e-01 85.1% 95.0%
3971149 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 83.0 6.79e-01 100.0% 57.5%
3971395 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 82.0 6.91e-01 100.0% 61.3%
4966195 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.91 75.0 6.50e-01 89.4% 60.0%
3983411 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.91 78.0 6.51e-01 95.7% 57.3%
5051712 101.1.4.90 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_23 0.91 68.0 6.40e-01 83.0% 67.3%
3972638 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 84.0 7.41e-01 100.0% 72.3%
3873677 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.90 70.0 6.04e-01 87.2% 55.7%
4024517 101.1.1.64 alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.90 80.0 5.86e-01 100.0% 40.0%
3860590 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.89 74.0 7.27e-01 89.4% 84.0%
3967026 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 78.0 6.57e-01 95.7% 60.0%
3968008 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 75.0 7.42e-01 93.6% 88.0%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 81.0 6.52e-01 100.0% 55.3%
4280807 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.89 76.0 7.20e-01 93.6% 80.0%
4037682 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.88 81.0 6.17e-01 100.0% 47.0%
3283374 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 80.0 6.23e-01 100.0% 50.5%
3970884 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.88 76.0 5.91e-01 93.6% 46.3%
4944862 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 79.0 6.56e-01 100.0% 60.0%
3786618 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.88 75.0 5.43e-01 93.6% 35.5%
3913655 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 77.0 6.38e-01 97.9% 57.5%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 73.0 5.60e-01 93.6% 41.9%
4497189 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.87 75.0 6.72e-01 95.7% 70.8%
4520564 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 71.0 5.90e-01 89.4% 55.0%
3972713 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 78.0 6.12e-01 100.0% 50.5%
4202221 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.87 79.0 6.91e-01 100.0% 69.1%
None 0.87 79.0 4.81e-01 100.0% 18.4%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 78.0 7.14e-01 100.0% 78.3%
4945127 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 78.0 6.33e-01 100.0% 56.5%
4304581 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.87 78.0 6.14e-01 100.0% 50.0%
4106860 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.86 72.0 5.71e-01 93.6% 46.3%
4947436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 77.0 7.33e-01 100.0% 87.3%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.86 75.0 7.14e-01 97.9% 87.3%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.86 77.0 6.87e-01 100.0% 72.3%
4997411 101.1.3.33 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.86 76.0 6.37e-01 100.0% 60.0%
3284469 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 77.0 6.52e-01 100.0% 62.7%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.86 70.0 6.00e-01 87.2% 58.6%
4947806 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 69.0 5.29e-01 85.1% 42.1%
4980021 101.1.3.33 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.86 76.0 6.66e-01 100.0% 68.6%
5064701 101.1.2.879 alpha arrays › HTH › HTH › winged helix domain › DUF134 0.86 76.0 6.35e-01 100.0% 60.0%
3916395 101.1.1.129 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.85 77.0 5.84e-01 100.0% 44.8%
2464007 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 74.0 6.57e-01 95.7% 71.2%
3959252 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 76.0 6.99e-01 100.0% 80.0%
None 0.85 74.0 5.63e-01 100.0% 42.2%
2448404 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.85 74.0 6.86e-01 97.9% 88.3%
3284051 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.85 73.0 6.57e-01 95.7% 70.8%
3286778 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 74.0 6.45e-01 97.9% 68.6%
3284011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 76.0 6.60e-01 100.0% 70.0%
4244028 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.84 75.0 6.91e-01 100.0% 80.0%
4007596 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.84 72.0 7.10e-01 95.7% 88.0%
3973360 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 75.0 6.55e-01 100.0% 67.1%
3969641 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.84 75.0 6.24e-01 100.0% 60.0%
3946049 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 74.0 7.27e-01 95.7% 92.0%
3795916 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 67.0 6.85e-01 87.2% 93.3%
3279339 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.84 74.0 4.84e-01 97.9% 27.0%
None 0.84 75.0 5.63e-01 100.0% 42.7%
4309654 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.84 68.0 6.43e-01 87.2% 74.5%
4205790 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 74.0 6.19e-01 100.0% 58.7%
3989117 101.1.1.129 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.84 71.0 5.53e-01 95.7% 46.0%
3955987 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 74.0 5.84e-01 100.0% 50.5%
4270967 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.83 73.0 5.54e-01 100.0% 43.6%
4604979 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 71.0 5.46e-01 95.7% 43.3%
4289285 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 74.0 5.93e-01 100.0% 53.3%
4334910 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.83 73.0 5.33e-01 100.0% 38.4%
4663875 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.83 73.0 4.59e-01 100.0% 20.0%
3971665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 73.0 6.26e-01 100.0% 64.0%
4237551 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 72.0 5.75e-01 100.0% 50.5%
4238054 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.82 73.0 4.57e-01 100.0% 19.6%
4577850 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.82 73.0 5.71e-01 100.0% 48.5%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 71.0 6.57e-01 95.7% 78.3%
2330636 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 69.0 6.72e-01 95.7% 86.8%
None 0.82 73.0 5.57e-01 100.0% 44.8%
5023952 101.1.2.888 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 0.82 71.0 6.20e-01 95.7% 64.3%
None 0.82 72.0 4.53e-01 100.0% 19.6%
3587538 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 72.0 6.38e-01 100.0% 69.1%
5046600 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 67.0 5.33e-01 89.4% 47.8%
3951829 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.82 72.0 5.92e-01 100.0% 56.5%
3883738 101.1.3.20 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_4 0.82 70.0 5.61e-01 95.7% 51.1%
3959876 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 72.0 5.60e-01 100.0% 51.0%
4148347 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.82 71.0 5.46e-01 97.9% 45.2%
4541333 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 6.79e-01 93.6% 88.0%
3887530 101.1.10.41 alpha arrays › HTH › HTH › Cyclin-like › HTH_Tnp_4 0.81 69.0 5.59e-01 95.7% 51.1%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.81 70.0 6.26e-01 95.7% 70.8%
4928203 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.81 70.0 4.67e-01 100.0% 24.9%
4279016 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 70.0 5.92e-01 100.0% 58.7%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 71.0 6.09e-01 100.0% 64.0%
4102958 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 69.0 6.20e-01 95.7% 78.5%
4059731 101.1.1.64 alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.80 68.0 5.34e-01 100.0% 44.8%
3987867 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 70.0 6.84e-01 95.7% 92.0%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.80 71.0 6.64e-01 97.9% 82.5%
4683276 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 68.0 5.46e-01 97.9% 49.5%
3974736 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 69.0 5.73e-01 100.0% 55.3%
1291824 101.1.1.95 alpha arrays › HTH › HTH › Three-helical HTH › PhyR_sigma-like 0.78 64.0 6.45e-01 95.7% 95.8%
3279913 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 68.0 4.51e-01 100.0% 73.7%
3589532 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 63.0 5.06e-01 97.9% 49.0%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 62.0 4.98e-01 95.7% 80.0%