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IMGVR_UViG_3300010351_000965-3300010351-Ga0116248_1000502926

Arc-Vir

IMGVR_UViG_3300010351_000965-3300010351-Ga0116248_1000502926

Quality

90.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-254
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01755.24 best Glyco_transf_25 34.3 3.10e-08 67.9% 91.0%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1foaA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.70 57.0 6.07e-01 83.5% 99.1%
5ggiB01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.70 63.0 6.52e-01 99.2% 100.0%
1fgxA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.69 50.0 4.79e-01 90.1% 65.1%
1wu7A03 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.63 24.0 3.80e-01 91.8% 86.6%
2ozzA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 22.0 3.49e-01 82.7% 82.4%
1jflA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 27.0 3.92e-01 81.9% 89.0%
2q5cA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 24.0 3.72e-01 93.4% 88.7%
2eggB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.60 29.0 3.68e-01 95.5% 74.7%
2y6pB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.59 51.0 5.29e-01 90.9% 97.9%
2d5cA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.59 27.0 3.81e-01 81.1% 90.3%
4bjhB01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.59 25.0 3.16e-01 90.5% 63.3%
2pjuC01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 24.0 3.61e-01 93.4% 89.0%
2gkgA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 26.0 3.57e-01 92.2% 83.6%
3olcX02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.57 24.0 3.62e-01 73.3% 93.9%
4kxwA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 26.0 3.41e-01 93.4% 79.7%
2d0oB00 3.40.50.10150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit 0.54 25.0 3.62e-01 98.8% 95.4%
5swvC02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.54 27.0 3.55e-01 91.8% 84.6%
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 25.0 3.56e-01 98.8% 92.7%
1dz3A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 25.0 3.36e-01 92.2% 82.1%
6o9aA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 23.0 3.31e-01 94.7% 84.1%
3fkqA01 3.40.50.10850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ntrc-like two-domain protein. 0.54 24.0 3.37e-01 94.7% 85.3%
3eeqA01 3.40.50.11220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 25.0 3.42e-01 95.1% 85.0%
3euaA03 3.40.50.12570 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 22.0 3.40e-01 89.3% 94.7%
1npdB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.53 26.0 3.37e-01 93.0% 79.7%
3jyoA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.53 27.0 3.50e-01 91.8% 83.5%
2bonA01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.53 29.0 3.89e-01 100.0% 100.0%
1evlA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 25.0 3.58e-01 100.0% 95.5%
3hdvB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 26.0 3.51e-01 94.7% 88.9%
3clkB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 25.0 3.52e-01 98.4% 90.2%
3cfyA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 26.0 3.42e-01 94.7% 84.6%
3vpbA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 22.0 3.34e-01 90.9% 93.1%
5x5jA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 26.0 3.63e-01 100.0% 97.5%
3b2nA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 27.0 3.65e-01 100.0% 99.2%
4c6sA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.51 28.0 3.53e-01 93.4% 88.0%
5t3yA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 27.0 3.68e-01 99.6% 98.4%
4zylB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 30.0 3.78e-01 99.2% 95.8%
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 26.0 3.57e-01 98.8% 93.8%
3t6kA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 26.0 3.64e-01 100.0% 98.4%
3rotA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 27.0 3.59e-01 98.8% 93.3%
1k68A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 29.0 3.72e-01 98.8% 96.4%
2g8lA03 3.40.50.10880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF01937, DUF89, domain 3 0.50 29.0 3.56e-01 93.0% 88.7%
2zayA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 27.0 3.60e-01 100.0% 99.2%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4022003 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.78 72.0 6.42e-01 94.7% 92.2%
3687951 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.78 71.0 6.60e-01 94.7% 88.4%
3688866 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.77 71.0 6.53e-01 94.7% 87.1%
3723858 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.76 73.0 6.42e-01 100.0% 93.5%
3728448 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.75 72.0 6.32e-01 100.0% 92.6%
3164334 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.75 63.0 6.53e-01 86.8% 94.3%
3993602 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.74 64.0 6.18e-01 89.3% 85.3%
3690164 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.73 70.0 6.09e-01 100.0% 89.4%
4052999 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.71 18.0 3.94e-01 84.8% 98.1%
3995820 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.71 55.0 6.13e-01 89.7% 99.0%
3394097 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.70 26.0 4.10e-01 93.4% 83.0%
3241320 7516.1.1.130 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › PF30737 0.70 63.0 6.24e-01 93.8% 90.6%
3982578 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.70 67.0 6.58e-01 99.6% 98.8%
3654369 7516.1.1.14 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I 0.70 66.0 5.35e-01 100.0% 56.2%
None 0.70 66.0 5.42e-01 100.0% 58.5%
3231126 7516.1.1.14 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I 0.69 66.0 5.40e-01 100.0% 60.1%
3581163 7516.1.1.14 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I 0.69 66.0 5.37e-01 100.0% 59.3%
3621369 7516.1.1.14 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I 0.69 65.0 5.57e-01 100.0% 65.9%
3270922 7516.1.1.14 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I 0.68 65.0 5.44e-01 100.0% 67.8%
3925079 7516.1.1.14 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I 0.68 65.0 5.23e-01 100.0% 57.3%
3260470 7516.1.1.14 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I 0.65 62.0 5.15e-01 100.0% 64.7%
4074525 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.65 25.0 3.87e-01 93.0% 85.0%
3750077 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.63 58.0 5.01e-01 96.3% 67.6%
4396346 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.63 24.0 3.64e-01 93.0% 80.0%
3914446 7516.1.1.178 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8, Glyco_transf_49 0.63 57.0 4.10e-01 96.3% 35.9%
4174421 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.63 24.0 3.88e-01 94.7% 90.5%
3405596 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.61 25.0 3.63e-01 94.7% 79.1%
4455003 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.61 24.0 3.93e-01 94.7% 97.8%
3326566 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.60 54.0 4.70e-01 95.1% 86.8%
3422911 7516.1.1.69 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_92 0.60 54.0 4.63e-01 95.1% 83.4%
3589806 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.60 55.0 5.21e-01 96.3% 85.0%
4671615 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.59 24.0 3.58e-01 94.7% 84.8%
4989369 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.59 24.0 3.76e-01 85.6% 96.7%
3797383 7516.1.1.12 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Fringe 0.59 52.0 4.97e-01 96.3% 80.4%
4947642 2007.1.9.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 0.58 29.0 3.75e-01 92.2% 82.1%
4982750 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.57 26.0 3.77e-01 93.4% 94.3%
3218932 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.57 47.0 4.37e-01 100.0% 69.0%
5008297 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.56 24.0 3.58e-01 93.4% 97.8%
5061651 7576.1.1.1 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Peptidase_C25 0.55 32.0 3.92e-01 84.4% 87.7%
3602098 2007.23.1.1 a/b three-layered sandwiches › Flavodoxin-like › CbiG N-terminal domain-like › CbiG N-terminal domain-like › CbiG_N 0.54 24.0 3.50e-01 94.7% 90.0%
3970098 2007.1.9.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 0.54 28.0 3.39e-01 93.4% 73.8%
3965997 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.53 26.0 3.55e-01 94.7% 88.8%
10970 2007.23.1.1 a/b three-layered sandwiches › Flavodoxin-like › CbiG N-terminal domain-like › CbiG N-terminal domain-like › CbiG_N 0.53 25.0 3.42e-01 95.1% 84.3%
5060179 7576.1.1.1 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Peptidase_C25 0.53 31.0 3.78e-01 84.4% 89.0%
1520397 7523.1.1.28 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_8 0.53 24.0 3.50e-01 91.4% 95.3%
5054925 7576.1.1.1 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Peptidase_C25 0.52 32.0 3.75e-01 84.0% 86.7%
5008503 7576.1.1.1 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Peptidase_C25 0.51 31.0 3.91e-01 94.7% 98.6%
5034183 7576.1.1.1 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Peptidase_C25 0.51 33.0 3.83e-01 84.4% 89.4%
1697439 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 30.0 3.78e-01 99.2% 95.8%
4927330 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.51 24.0 3.46e-01 100.0% 98.1%
5035242 7576.1.1.1 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Peptidase_C25 0.51 32.0 3.83e-01 96.3% 93.1%
3387132 2007.1.9.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC 0.51 29.0 3.44e-01 98.8% 80.5%
3294106 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 25.0 3.28e-01 94.7% 83.0%
4385737 2007.1.9.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC 0.51 28.0 3.52e-01 98.8% 87.6%
3274120 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.50 25.0 3.34e-01 94.7% 88.0%
3603262 2007.13.1.0 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit 0.50 23.0 3.21e-01 83.5% 87.8%