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IMGVR_UViG_3300010354_010007-3300010354-Ga0129333_100160074

Arc-Vir

IMGVR_UViG_3300010354_010007-3300010354-Ga0129333_100160074

Identity

Kingdom:
archaea

Quality

91.1 mean pLDDT

Cluster

View cluster (8 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-87
PDB
Domain cluster: rep: IMGVR_UViG_3300028677_000685-3300028677-Ga0255346_10043513__D4-87
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21241.3 best UvsW_N 55.7 7.00e-15 97.5% 85.2%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rifA01 3.30.780.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.95 89.0 8.55e-01 100.0% 88.9%
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.80 52.0 6.15e-01 100.0% 94.7%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 44.0 3.87e-01 100.0% 47.0%
2v5gA00 3.40.1690.10 Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU 0.61 37.0 3.25e-01 100.0% 41.7%
2gqrA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 42.0 3.89e-01 76.5% 72.0%
2hkeA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.57 47.0 3.58e-01 92.6% 76.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1030909 3696.1.1.3 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › UvsW_N 0.95 89.0 8.68e-01 100.0% 92.0%
5014579 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.86 74.0 7.75e-01 100.0% 98.7%
3946211 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.84 71.0 7.14e-01 100.0% 90.0%
2631980 3696.1.1.2 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › XPB_DRD 0.82 53.0 5.50e-01 100.0% 70.1%
4991995 3696.1.1.2 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › XPB_DRD 0.82 58.0 6.40e-01 100.0% 90.8%
3261672 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.77 73.0 7.00e-01 100.0% 92.2%
5010613 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.77 58.0 6.38e-01 100.0% 98.5%
2631918 3696.1.1.2 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › XPB_DRD 0.77 48.0 5.57e-01 100.0% 89.7%
5010603 101.1.9.75 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF61 0.74 50.0 5.58e-01 100.0% 93.3%
3409500 3696.1.1.1 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.73 57.0 6.10e-01 98.8% 94.3%
3367042 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.73 40.0 4.25e-01 100.0% 60.8%
4372354 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.70 53.0 5.59e-01 100.0% 92.9%
3311675 242.3.1.1 ↗ a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I 0.70 53.0 4.72e-01 100.0% 58.2%
5050626 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 50.0 4.04e-01 100.0% 40.0%
4945655 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 40.0 3.78e-01 100.0% 48.0%
4956777 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.68 58.0 5.89e-01 100.0% 95.0%
3973554 306.3.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.64 53.0 5.23e-01 100.0% 84.1%
3948373 304.8.1.69 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › YejG 0.64 58.0 5.25e-01 100.0% 90.8%
4246639 4104.1.1.1 ↗ beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like › Bac_export_2 0.57 35.0 3.12e-01 100.0% 43.5%
5054763 2006.1.1.14 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.52 36.0 2.81e-01 71.6% 55.8%
D2 high residues 104-281
PDB
Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF18766.8 best SWI2_SNF2 28.4 1.80e-06 88.8% 57.7%
PF00270.36 DEAD 57.1 2.60e-15 84.3% 95.2%
PF04851.22 ResIII 89.1 4.40e-25 83.7% 98.2%