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IMGVR_UViG_3300010356_002670-3300010356-Ga0116237_100312201

Arc-Vir

IMGVR_UViG_3300010356_002670-3300010356-Ga0116237_100312201

Quality

48.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 49-130
PDB
D2 high residues 160-220
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.73 46.0 5.42e-01 82.0% 100.0%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 60.0 5.16e-01 96.7% 65.3%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.67 58.0 4.93e-01 98.4% 63.5%
4osnA00 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.67 47.0 3.83e-01 73.8% 69.1%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 54.0 3.99e-01 98.4% 37.6%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 51.0 4.88e-01 98.4% 93.2%
3d2mA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 48.0 3.58e-01 86.9% 75.3%
2fiaB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 42.0 3.15e-01 75.4% 66.0%
6wqbA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 47.0 3.62e-01 86.9% 83.6%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.58 48.0 4.55e-01 95.1% 97.4%
2pdoA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 49.0 3.84e-01 91.8% 94.4%
3i3tA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 44.0 2.83e-01 83.6% 23.4%
1q2yA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 48.0 3.65e-01 91.8% 80.7%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 50.0 4.14e-01 100.0% 66.1%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 44.0 3.61e-01 96.7% 45.6%
6i18A04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 37.0 3.21e-01 70.5% 86.0%
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.19e-01 73.8% 83.5%
3tg9A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 43.0 2.82e-01 91.8% 19.9%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.55 40.0 3.26e-01 78.7% 41.0%
1vx7H01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.55 46.0 4.21e-01 98.4% 83.5%
1dq3A02 3.30.160.90 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 44.0 4.16e-01 93.4% 75.0%
3frmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 45.0 2.99e-01 91.8% 46.0%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 36.0 3.41e-01 91.8% 58.1%
1rm6A05 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.53 45.0 3.27e-01 93.4% 34.7%
3x29A00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.53 46.0 3.34e-01 96.7% 65.7%
2yrtA00 4.10.1130.20 Few Secondary Structures › Irregular › btk motif of tyrosine-protein kinase itk › 0.52 43.0 4.13e-01 96.7% 80.0%
2kcjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.41e-01 86.9% 50.9%
2g3aA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 37.0 3.15e-01 77.0% 67.6%
2uuxA01 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.51 26.0 3.03e-01 98.4% 66.7%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 39.0 3.07e-01 82.0% 83.9%
2fsrA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 3.02e-01 91.8% 77.2%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.50 40.0 3.49e-01 88.5% 86.5%
4iw9B01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 39.0 3.40e-01 88.5% 64.7%
6jyxA01 2.10.270.20 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › 0.50 35.0 2.87e-01 75.4% 66.1%
2v5oA05 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.50 39.0 3.09e-01 88.5% 67.1%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3400885 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.81 46.0 5.77e-01 77.0% 100.0%
3535885 386.1.1.226 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Znf-C2H2_ZNF142 0.80 46.0 5.74e-01 80.3% 100.0%
3927790 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.78 54.0 6.17e-01 82.0% 97.8%
3888557 214.1.1.7 a+b two layers › SH2 › SH2 › SH2 › SH2_1 0.75 64.0 5.04e-01 96.7% 57.7%
3916025 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.75 63.0 4.74e-01 93.4% 47.6%
1384885 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.74 58.0 5.13e-01 85.2% 63.6%
3477642 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.73 60.0 4.84e-01 91.8% 55.8%
3535755 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.73 61.0 4.68e-01 93.4% 50.0%
3875076 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.73 63.0 4.75e-01 96.7% 48.3%
3784543 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.71 54.0 4.92e-01 85.2% 74.1%
3905631 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.71 59.0 4.88e-01 93.4% 61.8%
3905081 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.70 58.0 4.62e-01 91.8% 52.8%
3216674 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.70 60.0 4.92e-01 96.7% 62.6%
3933294 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 55.0 4.69e-01 91.8% 70.5%
3310050 375.4.1.5 few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › RPA_interact_C 0.68 35.0 4.11e-01 73.8% 72.5%
3629488 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.68 59.0 4.82e-01 98.4% 70.4%
4929483 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 46.0 3.66e-01 70.5% 62.5%
3669824 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.67 53.0 5.50e-01 90.2% 94.5%
3755862 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 58.0 5.04e-01 98.4% 70.5%
3387018 131.1.1.15 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III 0.67 40.0 2.86e-01 96.7% 21.1%
3421203 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.66 49.0 4.97e-01 88.5% 81.7%
3581854 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.65 52.0 4.57e-01 86.9% 82.2%
3924908 386.1.1.251 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7381 0.62 46.0 3.88e-01 78.7% 74.0%
3279395 213.1.1.35 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_CG 0.62 53.0 4.50e-01 91.8% 82.1%
3456246 330.1.1.19 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 0.61 53.0 4.69e-01 98.4% 83.3%
3960569 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.61 51.0 4.37e-01 91.8% 80.0%
3263006 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.60 51.0 3.80e-01 95.1% 90.6%
5018156 213.1.1.31 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.60 48.0 3.61e-01 86.9% 80.0%
3225057 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 46.0 3.30e-01 85.2% 31.4%
5033243 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.60 40.0 3.74e-01 70.5% 57.5%
11080 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.60 42.0 3.15e-01 75.4% 66.9%
3971476 213.1.1.23 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › PanZ 0.59 46.0 3.65e-01 86.9% 91.5%
4467867 3784.1.1.0 a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related 0.58 41.0 3.19e-01 77.0% 88.3%
3411655 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 49.0 2.90e-01 100.0% 17.6%
3595936 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 51.0 3.16e-01 98.4% 34.7%
4928008 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.57 47.0 2.97e-01 90.2% 39.7%
5008130 213.1.1.35 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_CG 0.57 48.0 4.14e-01 91.8% 78.9%
5046796 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.57 48.0 3.50e-01 91.8% 77.5%
3323175 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.57 47.0 4.12e-01 90.2% 88.9%
4996495 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.57 47.0 3.40e-01 90.2% 74.4%
3614289 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 45.0 2.76e-01 88.5% 14.2%
5051679 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 46.0 3.52e-01 91.8% 80.7%
3244142 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.56 47.0 3.20e-01 91.8% 55.2%
4946000 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.56 46.0 3.60e-01 91.8% 88.8%
3920610 633.23.1.2 alpha bundles › Bromodomain-like › Claudin › Claudin › GSG-1 0.56 47.0 3.33e-01 93.4% 68.1%
4980010 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 46.0 3.37e-01 91.8% 75.8%
3486241 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 41.0 4.16e-01 80.3% 86.7%
4279367 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 46.0 4.22e-01 91.8% 96.2%
4945465 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 46.0 3.48e-01 91.8% 80.7%
4352101 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 45.0 3.43e-01 90.2% 78.6%
4140251 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 45.0 3.38e-01 90.2% 82.0%
5068824 213.1.1.31 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.55 43.0 3.43e-01 83.6% 63.5%
4153551 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 44.0 3.52e-01 90.2% 90.3%
3287547 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 44.0 3.33e-01 91.8% 86.5%
3229102 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 43.0 2.98e-01 96.7% 23.6%
3406773 241.10.1.1 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 0.53 38.0 3.71e-01 90.2% 68.6%
4980036 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 37.0 3.11e-01 75.4% 98.2%
5045157 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 42.0 3.15e-01 91.8% 78.2%
3284138 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 42.0 3.23e-01 90.2% 90.0%
4022955 3559.1.1.50 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › PF28561 0.52 35.0 2.63e-01 70.5% 69.7%
3714105 304.48.1.11 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.52 40.0 2.74e-01 100.0% 25.8%
3935730 241.10.1.1 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 0.51 40.0 3.62e-01 90.2% 62.2%
3602840 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.51 42.0 2.96e-01 96.7% 48.4%
3597294 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 40.0 2.53e-01 90.2% 28.5%
3280094 212.1.1.3 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N 0.50 41.0 2.88e-01 93.4% 35.5%
5046945 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.50 38.0 2.93e-01 85.2% 69.0%