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IMGVR_UViG_3300010411_000183-3300010411-Ga0136993_100033105
Arc-VirIMGVR_UViG_3300010411_000183-3300010411-Ga0136993_100033105
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-121
Domain cluster:
rep: OQ436456.1__WEU67474.1__X__00207__D57-148
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p62A01 | 3.40.50.10620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PH0156-like domains | 0.72 | 63.0 | 5.03e-01 | 98.6% | 64.2% |
| 3t5tB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.70 | 57.0 | 3.86e-01 | 91.9% | 38.7% |
| 3eeqA01 | 3.40.50.11220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 49.0 | 4.15e-01 | 100.0% | 46.7% |
| 2o0jA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 58.0 | 3.99e-01 | 100.0% | 29.5% |
| 3jvdB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 51.0 | 4.36e-01 | 97.3% | 51.6% |
| 3gg9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 45.0 | 3.63e-01 | 98.6% | 37.5% |
| 6wctD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 48.0 | 3.90e-01 | 100.0% | 40.8% |
| 1z7mF01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 52.0 | 4.49e-01 | 98.6% | 56.2% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 51.0 | 4.18e-01 | 91.9% | 92.1% |
| 4rxtA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 52.0 | 4.23e-01 | 98.6% | 48.9% |
| 4ry9A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 50.0 | 4.12e-01 | 100.0% | 48.1% |
| 4ry8A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 49.0 | 4.00e-01 | 100.0% | 44.6% |
| 2pjuC01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 45.0 | 4.11e-01 | 98.6% | 58.0% |
| 6z0pB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 52.0 | 3.79e-01 | 100.0% | 59.4% |
| 4hh3C02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.61 | 49.0 | 4.17e-01 | 91.9% | 83.3% |
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.61 | 52.0 | 3.97e-01 | 98.6% | 40.9% |
| 7d27A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.61 | 52.0 | 3.78e-01 | 100.0% | 42.2% |
| 4kmrA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 49.0 | 4.17e-01 | 100.0% | 52.8% |
| 2xciA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.60 | 49.0 | 3.69e-01 | 90.5% | 70.6% |
| 5swvC02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.60 | 45.0 | 3.73e-01 | 98.6% | 44.1% |
| 3k96A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 48.0 | 3.68e-01 | 93.2% | 54.0% |
| 1mkyA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 4.05e-01 | 98.6% | 49.3% |
| 1utbB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 45.0 | 3.80e-01 | 100.0% | 48.4% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.58 | 47.0 | 3.61e-01 | 90.5% | 84.0% |
| 2i0fA00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.58 | 46.0 | 3.79e-01 | 90.5% | 75.5% |
| 1byuB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 3.50e-01 | 100.0% | 52.1% |
| 2ejbA00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.55 | 45.0 | 3.50e-01 | 93.2% | 64.8% |
| 2id0A04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 42.0 | 3.98e-01 | 90.5% | 70.1% |
| 6hxqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 46.0 | 3.96e-01 | 100.0% | 79.8% |
| 1e8cB03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.54 | 44.0 | 3.63e-01 | 91.9% | 99.3% |
| 3u7iA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 44.0 | 3.23e-01 | 93.2% | 96.3% |
| 2ql3A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 44.0 | 4.01e-01 | 91.9% | 67.7% |
| 3tnjA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 47.0 | 4.02e-01 | 100.0% | 79.3% |
| 1ckeA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.32e-01 | 100.0% | 68.4% |
| 4irxA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 43.0 | 3.66e-01 | 97.3% | 66.4% |
| 1d4oA00 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.52 | 44.0 | 3.45e-01 | 100.0% | 71.8% |
| 3hdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.46e-01 | 98.6% | 86.3% |
| 2bi7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 41.0 | 3.10e-01 | 90.5% | 81.6% |
| 3l8uA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.51 | 40.0 | 3.35e-01 | 91.9% | 80.5% |
| 1yp1A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 42.0 | 3.14e-01 | 93.2% | 59.3% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2132278 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.82 | 75.0 | 5.25e-01 | 100.0% | 35.2% |
| 5082826 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.80 | 72.0 | 5.00e-01 | 100.0% | 36.6% |
| 5081096 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.76 | 67.0 | 4.85e-01 | 100.0% | 35.7% |
| 4330403 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.75 | 51.0 | 5.52e-01 | 100.0% | 86.7% |
| 5054646 | 2004.1.1.123 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD | 0.72 | 59.0 | 4.22e-01 | 100.0% | 30.5% |
| 3942672 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.72 | 63.0 | 4.51e-01 | 100.0% | 33.2% |
| 5012811 | 2006.1.3.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DUF3226 | 0.71 | 63.0 | 4.96e-01 | 98.6% | 62.1% |
| 5081670 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.70 | 62.0 | 4.50e-01 | 100.0% | 35.7% |
| 4929630 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 59.0 | 4.08e-01 | 100.0% | 26.7% |
| 4081551 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.70 | 57.0 | 4.31e-01 | 90.5% | 85.0% |
| 5041616 | 213.1.1.120 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NAT10_TcmA_helicase | 0.70 | 59.0 | 3.41e-01 | 100.0% | 10.4% |
| 4118691 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.69 | 60.0 | 4.28e-01 | 100.0% | 32.3% |
| 5000717 | 2004.1.1.123 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD | 0.68 | 58.0 | 4.32e-01 | 100.0% | 36.0% |
| 3580531 | 2004.1.1.230 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tsr1_G-like | 0.66 | 57.0 | 4.39e-01 | 100.0% | 48.9% |
| 4946440 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 56.0 | 4.18e-01 | 100.0% | 40.5% |
| 5001118 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.65 | 56.0 | 4.40e-01 | 100.0% | 46.1% |
| 4360324 | 3398.1.1.2 ↗ | a/b three-layered sandwiches › STING C-terminal domain › STING C-terminal domain › STING C-terminal domain › prok_STING | 0.65 | 55.0 | 4.38e-01 | 98.6% | 78.1% |
| 4120818 | 7523.1.1.10 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › HisG | 0.64 | 54.0 | 4.71e-01 | 98.6% | 60.9% |
| 4983636 | 2011.2.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › tRNA_deacylase | 0.64 | 52.0 | 3.99e-01 | 93.2% | 37.8% |
| 3282966 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.63 | 51.0 | 3.90e-01 | 98.6% | 37.6% |
| 3969104 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.63 | 50.0 | 5.09e-01 | 100.0% | 92.9% |
| 4316797 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.63 | 46.0 | 3.76e-01 | 100.0% | 40.7% |
| 3332190 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 54.0 | 4.37e-01 | 98.6% | 84.1% |
| 5057828 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 47.0 | 3.49e-01 | 85.1% | 82.8% |
| 4248677 | 7523.1.1.10 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › HisG | 0.60 | 51.0 | 4.44e-01 | 98.6% | 78.3% |
| 5026767 | 3006.1.1.1 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Lsm_C | 0.59 | 46.0 | 4.74e-01 | 86.5% | 88.6% |
| 3252935 | 2006.1.6.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Med25_VWA | 0.58 | 45.0 | 3.38e-01 | 86.5% | 88.0% |
| 3270988 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.57 | 49.0 | 3.72e-01 | 100.0% | 39.5% |
| 4944043 | 3006.1.1.0 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain | 0.57 | 43.0 | 4.65e-01 | 85.1% | 100.0% |
| 4337535 | 2004.1.1.71 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IPPT | 0.57 | 47.0 | 3.41e-01 | 100.0% | 51.8% |
| 3582596 | 2007.1.6.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain | 0.57 | 49.0 | 4.85e-01 | 100.0% | 92.5% |
| 376500 | 2004.1.1.206 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 | 0.56 | 47.0 | 3.46e-01 | 100.0% | 65.1% |
| 3487246 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.56 | 45.0 | 3.37e-01 | 91.9% | 87.0% |
| 4160733 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.55 | 43.0 | 3.23e-01 | 89.2% | 87.1% |
| 3895899 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.54 | 46.0 | 3.51e-01 | 100.0% | 46.8% |
| 5016726 | 7512.1.1.107 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF354 | 0.53 | 42.0 | 3.28e-01 | 91.9% | 91.9% |
| 3495989 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 42.0 | 3.54e-01 | 93.2% | 81.4% |
| 1524225 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 44.0 | 3.75e-01 | 93.2% | 94.3% |
| 5035992 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.52 | 42.0 | 3.76e-01 | 93.2% | 65.2% |
| 3936794 | 7529.1.1.0 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like | 0.52 | 44.0 | 3.47e-01 | 100.0% | 57.7% |
| 5035523 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.51 | 42.0 | 3.85e-01 | 98.6% | 73.3% |
| None | — | 0.51 | 37.0 | 2.54e-01 | 82.4% | 60.6% | |
| 5009901 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 42.0 | 3.35e-01 | 98.6% | 62.9% |
| 4943911 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.50 | 42.0 | 2.89e-01 | 97.3% | 67.1% |