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IMGVR_UViG_3300010413_000100-3300010413-Ga0136851_100009678
Arc-VirIMGVR_UViG_3300010413_000100-3300010413-Ga0136851_100009678
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 55-107
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vyrA00 | 1.10.245.10 | Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain | 0.71 | 57.0 | 4.89e-01 | 88.7% | 80.0% |
| 4xr7E01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.62 | 42.0 | 2.60e-01 | 71.7% | 22.1% |
| 1sq5C00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 43.0 | 2.68e-01 | 75.5% | 58.7% |
| 1c00A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 47.0 | 2.77e-01 | 100.0% | 14.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4010451 | 3788.1.1.15 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PF27202 | 0.74 | 35.0 | 3.10e-01 | 90.6% | 32.0% |
| 3190964 | 130.1.1.20 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › HeH | 0.68 | 46.0 | 4.60e-01 | 71.7% | 70.9% |
| 4959048 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.62 | 42.0 | 4.30e-01 | 77.4% | 76.0% |
| 3927575 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.60 | 43.0 | 4.20e-01 | 77.4% | 70.0% |
| 4928237 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.56 | 42.0 | 2.96e-01 | 81.1% | 39.4% |
| 3960590 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.54 | 45.0 | 3.17e-01 | 100.0% | 83.0% |
| 3951046 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.54 | 45.0 | 2.96e-01 | 100.0% | 63.0% |
| 3951222 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.52 | 35.0 | 3.26e-01 | 98.1% | 54.3% |
| 4015710 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 42.0 | 3.63e-01 | 94.3% | 88.2% |