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IMGVR_UViG_3300010413_001194-3300010413-Ga0136851_1002891111
Arc-VirIMGVR_UViG_3300010413_001194-3300010413-Ga0136851_1002891111
Identity
- Kingdom:
- archaea
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-97
Domain cluster:
rep: MT104122.1__QIG62552.1__X__00038__D20-102
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13730.13 best | HTH_36 | 49.5 | 3.90e-13 | 67.9% | 92.7% |
D2
medium
residues 141-228
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5vjhB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 42.0 | 4.23e-01 | 70.5% | 73.9% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.60 | 41.0 | 4.14e-01 | 70.5% | 83.7% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 36.0 | 3.76e-01 | 70.5% | 67.5% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 38.0 | 3.55e-01 | 76.1% | 100.0% |
| 2iz1A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 40.0 | 2.94e-01 | 83.0% | 89.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 52297 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 46.0 | 4.58e-01 | 75.0% | 77.8% |
| 3735247 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.64 | 48.0 | 3.85e-01 | 81.8% | 77.2% |
| 4398425 | 148.1.3.26 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 | 0.62 | 49.0 | 4.87e-01 | 86.4% | 88.4% |
| 2979523 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 46.0 | 5.02e-01 | 83.0% | 100.0% |
| 4960793 | 148.1.3.26 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 | 0.61 | 43.0 | 4.17e-01 | 76.1% | 70.5% |
| 3779468 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.60 | 45.0 | 4.54e-01 | 80.7% | 87.8% |
| 3781059 | 108.1.1.26 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 | 0.60 | 45.0 | 4.23e-01 | 80.7% | 74.5% |
| 3414135 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 45.0 | 4.58e-01 | 80.7% | 88.2% |
| 4485624 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.59 | 44.0 | 4.46e-01 | 80.7% | 82.2% |
| 4135698 | 143.2.1.1 ↗ | alpha arrays › PABP domain-like › Ribosomal protein L20 › Ribosomal protein L20 › Ribosomal_L20 | 0.56 | 39.0 | 3.46e-01 | 86.4% | 50.4% |
| 2858351 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.56 | 41.0 | 3.83e-01 | 79.5% | 81.9% |
| 4949240 | 2006.1.2.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHHA1 | 0.55 | 41.0 | 2.73e-01 | 77.3% | 62.8% |
| 2557383 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.53 | 45.0 | 4.07e-01 | 95.5% | 91.1% |
| 3679125 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 47.0 | 3.75e-01 | 100.0% | 78.9% |
| 3714253 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.52 | 44.0 | 4.02e-01 | 97.7% | 84.8% |