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IMGVR_UViG_3300010413_002140-3300010413-Ga0136851_100259321

Arc-Vir

IMGVR_UViG_3300010413_002140-3300010413-Ga0136851_100259321

Quality

89.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-81
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23139.2 best OB_YrrC 53.5 2.60e-14 100.0% 92.1%
D2 high residues 204-295
PDB
D3 medium residues 85-195
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cukA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.77 51.0 6.03e-01 71.2% 97.4%
3p5pA03 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.54 44.0 3.30e-01 91.0% 66.6%
4c2uA04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.52 46.0 4.02e-01 100.0% 84.0%
D4 medium residues 317-347
PDB
Domain cluster: representative
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3245888 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.73 57.0 4.00e-01 100.0% 25.8%
3299379 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.59 45.0 3.09e-01 100.0% 22.0%
3165714 4076.3.1.10 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › HeH 0.56 42.0 4.17e-01 100.0% 77.1%