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IMGVR_UViG_3300010413_002660-3300010413-Ga0136851_100020819

Arc-Vir

IMGVR_UViG_3300010413_002660-3300010413-Ga0136851_100020819

Quality

88.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-58
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14076.13 best DUF4258 25.3 2.10e-05 100.0% 95.8%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.80 71.0 5.97e-01 100.0% 81.9%
1q7fB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.79 54.0 3.37e-01 71.4% 14.2%
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.79 70.0 6.02e-01 100.0% 84.3%
3c7xA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.77 53.0 3.57e-01 71.4% 21.9%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.75 51.0 3.00e-01 76.8% 9.2%
3dueA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.74 51.0 3.88e-01 76.8% 32.3%
3al9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 53.0 3.07e-01 76.8% 10.2%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.73 53.0 3.59e-01 76.8% 23.0%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 53.0 3.28e-01 78.6% 14.4%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 51.0 2.98e-01 75.0% 9.2%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.72 52.0 3.51e-01 76.8% 22.0%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.72 54.0 3.26e-01 80.4% 12.8%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 51.0 3.17e-01 76.8% 13.6%
4a2lF02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 50.0 3.09e-01 76.8% 13.5%
4czxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 48.0 2.98e-01 73.2% 13.0%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 54.0 3.34e-01 96.4% 14.7%
2ghsA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.67 45.0 2.85e-01 71.4% 16.9%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 47.0 2.99e-01 76.8% 15.4%
2o3iA02 2.40.390.10 Mainly Beta › Beta Barrel › CV3147-like › CV3147-like 0.65 44.0 3.36e-01 76.8% 29.8%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 3.75e-01 75.0% 92.2%
2dg1C00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 56.0 3.46e-01 100.0% 77.2%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 44.0 2.78e-01 76.8% 13.9%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.61 42.0 3.13e-01 73.2% 32.7%
3vm7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 42.0 3.47e-01 73.2% 83.7%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.60 43.0 2.97e-01 78.6% 21.0%
2l1sA00 3.10.450.160 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr 0.59 48.0 4.26e-01 92.9% 80.7%
2bolB02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 47.0 3.70e-01 91.1% 75.8%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.79e-01 100.0% 82.7%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 47.0 4.39e-01 98.2% 76.8%
5llwA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 45.0 3.94e-01 96.4% 91.3%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.56 47.0 2.98e-01 100.0% 78.6%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.55 47.0 4.37e-01 98.2% 75.0%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.55 47.0 3.77e-01 98.2% 55.7%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 43.0 3.17e-01 100.0% 76.3%
6i18A04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 39.0 3.24e-01 83.9% 95.3%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.35e-01 87.5% 71.7%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 39.0 3.14e-01 85.7% 55.6%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5061645 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.92 87.0 8.27e-01 100.0% 92.1%
4993341 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.89 82.0 7.58e-01 100.0% 91.4%
5027650 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.87 79.0 7.53e-01 100.0% 98.5%
5042309 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.86 78.0 6.57e-01 100.0% 76.7%
4957034 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.82 54.0 3.22e-01 76.8% 10.4%
5026087 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.82 56.0 3.26e-01 71.4% 11.7%
3945861 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.81 73.0 6.20e-01 100.0% 81.1%
3839082 4312.1.1.20 a+b two layers › RelE-like › RelE-like › RelE-like › DUF3519, PBECR1 0.81 72.0 5.42e-01 100.0% 63.7%
5012768 5.1.10.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF6849 0.78 51.0 4.91e-01 71.4% 58.5%
4424574 4959.1.1.0 a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit 0.78 60.0 4.59e-01 96.4% 38.3%
5056195 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.77 53.0 3.20e-01 71.4% 12.8%
3868894 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.77 51.0 3.07e-01 71.4% 10.3%
3244937 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.77 53.0 3.38e-01 78.6% 15.3%
3701280 5.1.4.313 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.77 51.0 3.12e-01 71.4% 11.6%
3994676 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.76 54.0 3.60e-01 75.0% 22.4%
3643255 5.1.4.222 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.76 52.0 3.13e-01 71.4% 11.4%
5052460 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.76 54.0 3.24e-01 75.0% 15.9%
4030728 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.76 54.0 3.23e-01 75.0% 12.9%
3936499 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 50.0 2.74e-01 71.4% 4.7%
3788044 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.76 55.0 3.55e-01 80.4% 17.9%
3576508 234.3.1.0 a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.76 66.0 6.21e-01 100.0% 92.9%
4949974 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.75 50.0 3.11e-01 76.8% 12.6%
3471260 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.75 51.0 3.11e-01 71.4% 13.5%
3788344 5.1.4.337 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_CDC20-Fz 0.75 51.0 3.08e-01 71.4% 11.7%
3615439 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.75 50.0 3.11e-01 71.4% 13.0%
5054848 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.74 51.0 4.16e-01 76.8% 40.0%
3917232 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.74 51.0 3.40e-01 71.4% 20.0%
5001324 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 50.0 4.01e-01 75.0% 37.1%
4200872 4959.1.1.1 a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 0.74 56.0 4.39e-01 91.1% 39.1%
5057579 5.1.4.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.74 51.0 3.02e-01 71.4% 11.2%
3621626 5.1.4.61 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N 0.74 49.0 3.00e-01 71.4% 11.0%
3994733 5.1.3.209 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_BBS7 0.74 48.0 2.95e-01 71.4% 11.5%
3936589 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.74 53.0 3.17e-01 76.8% 13.2%
3879259 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.74 53.0 3.57e-01 76.8% 21.5%
3509084 5.1.10.10 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › Vps16_N 0.73 50.0 4.65e-01 71.4% 57.1%
3537300 5.1.4.313 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.73 48.0 2.94e-01 71.4% 11.7%
3576490 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 49.0 2.71e-01 71.4% 5.0%
4969674 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 52.0 3.15e-01 75.0% 17.0%
3518045 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.73 52.0 3.01e-01 76.8% 9.2%
3278208 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.73 51.0 3.06e-01 75.0% 14.1%
4949536 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 52.0 3.15e-01 76.8% 16.7%
4422293 4959.1.1.0 a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit 0.72 57.0 4.34e-01 91.1% 38.7%
3250883 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 51.0 4.11e-01 75.0% 41.0%
426018 5.1.4.27 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 51.0 3.16e-01 76.8% 13.4%
3809935 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.70 48.0 2.87e-01 75.0% 10.1%
3363154 6043.1.1.4 a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 0.70 57.0 4.97e-01 89.3% 96.4%
3369784 809.1.1.5 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › PHAF1 0.70 57.0 4.96e-01 89.3% 96.4%
4959306 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 57.0 3.46e-01 89.3% 79.7%
4891048 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.69 56.0 3.28e-01 89.3% 21.6%
3642805 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 47.0 2.88e-01 71.4% 12.0%
3230836 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.69 49.0 3.37e-01 78.6% 21.5%
3993002 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.68 49.0 3.27e-01 78.6% 20.0%
3740180 12.1.1.14 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.66 46.0 3.90e-01 73.2% 85.6%
4460735 3264.1.1.0 0.65 45.0 3.25e-01 71.4% 36.1%
4012486 5.1.4.321 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 0.64 52.0 3.04e-01 89.3% 12.2%
3517016 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 54.0 3.35e-01 94.6% 75.5%
3841970 6043.1.1.4 a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 0.64 53.0 4.67e-01 92.9% 95.2%
3241615 5.1.4.269 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML 0.61 48.0 2.95e-01 91.1% 14.0%
3935906 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.61 52.0 3.05e-01 96.4% 27.2%
3368676 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 54.0 3.09e-01 98.2% 93.1%
3336515 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.60 49.0 3.05e-01 91.1% 84.4%
3370448 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.60 54.0 3.11e-01 98.2% 91.8%
3821142 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.60 54.0 3.11e-01 98.2% 91.8%
3445390 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.60 49.0 3.93e-01 92.9% 71.3%
3307575 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.60 51.0 4.21e-01 94.6% 69.0%
119254 3155.1.1.1 a+b two layers › Uncharacterized protein yohN › Uncharacterized protein yohN › Uncharacterized protein yohN › RcnB 0.59 48.0 4.26e-01 92.9% 80.7%
3229045 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.58 44.0 3.74e-01 82.1% 66.3%
4679871 331.1.1.6 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.57 48.0 4.23e-01 98.2% 65.0%
3920905 220.1.1.19 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.56 44.0 3.53e-01 91.1% 58.9%
5014724 295.1.1.51 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.55 42.0 3.54e-01 85.7% 67.0%
4993386 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 47.0 4.01e-01 100.0% 72.6%
3509095 3425.2.1.3 a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › PF29809 0.54 46.0 2.90e-01 100.0% 44.2%
3242625 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.54 48.0 3.85e-01 100.0% 63.6%
3630433 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 3.41e-01 91.1% 82.6%
4937221 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.52 45.0 4.14e-01 100.0% 78.7%
5067782 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.50 43.0 4.03e-01 96.4% 80.0%