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IMGVR_UViG_3300010428_000142-3300010428-Ga0134103_10045578
Arc-VirIMGVR_UViG_3300010428_000142-3300010428-Ga0134103_10045578
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-111
Domain cluster:
rep: IMGVR_UViG_3300027007_000019-3300027007-Ga0207718_1029525__D22-116
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.73 | 36.0 | 4.50e-01 | 100.0% | 78.0% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 47.0 | 5.48e-01 | 98.0% | 97.0% |
| 4dkaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 57.0 | 6.03e-01 | 100.0% | 97.7% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 48.0 | 5.35e-01 | 96.9% | 92.0% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 53.0 | 5.39e-01 | 100.0% | 83.5% |
| 4pqxA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.68 | 48.0 | 5.41e-01 | 100.0% | 98.6% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 52.0 | 4.95e-01 | 100.0% | 71.1% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 54.0 | 5.37e-01 | 100.0% | 83.7% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 36.0 | 4.02e-01 | 100.0% | 68.0% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 50.0 | 4.94e-01 | 100.0% | 75.7% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 52.0 | 5.42e-01 | 100.0% | 93.3% |
| 3k59A01 | 2.40.50.590 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel | 0.66 | 48.0 | 5.13e-01 | 100.0% | 89.4% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 54.0 | 5.47e-01 | 100.0% | 91.8% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 56.0 | 5.44e-01 | 100.0% | 86.6% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 50.0 | 4.91e-01 | 100.0% | 77.4% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 53.0 | 5.37e-01 | 100.0% | 91.9% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 52.0 | 5.21e-01 | 100.0% | 89.0% |
| 3kf8A00 | 2.40.50.1040 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 54.0 | 4.33e-01 | 100.0% | 46.4% |
| 1xweA01 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 52.0 | 4.64e-01 | 100.0% | 63.6% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 42.0 | 4.06e-01 | 71.4% | 98.2% |
| 1fguB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 51.0 | 5.08e-01 | 100.0% | 88.6% |
| 1gd7A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 49.0 | 4.78e-01 | 99.0% | 79.8% |
| 3m4pA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 49.0 | 4.75e-01 | 100.0% | 78.6% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 51.0 | 4.95e-01 | 100.0% | 85.6% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 44.0 | 4.11e-01 | 83.7% | 95.9% |
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 44.0 | 4.46e-01 | 96.9% | 89.7% |
| 2gaiA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.55 | 40.0 | 3.70e-01 | 76.5% | 68.3% |
| 7k98B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 47.0 | 4.51e-01 | 100.0% | 84.2% |
| 3hi2B00 | 3.30.2310.40 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › | 0.53 | 31.0 | 3.18e-01 | 91.8% | 57.7% |
| 5uj1A03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.53 | 40.0 | 3.42e-01 | 82.7% | 90.6% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 36.0 | 2.42e-01 | 72.4% | 43.6% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4958429 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 62.0 | 6.30e-01 | 100.0% | 90.5% |
| 4995707 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 56.0 | 5.59e-01 | 100.0% | 81.0% |
| 4995606 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 51.0 | 5.27e-01 | 100.0% | 84.4% |
| 5035945 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.68 | 57.0 | 5.38e-01 | 100.0% | 76.5% |
| 3814285 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.67 | 60.0 | 5.78e-01 | 100.0% | 88.2% |
| 5030363 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.67 | 56.0 | 5.42e-01 | 100.0% | 80.9% |
| 5000768 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.67 | 57.0 | 5.46e-01 | 100.0% | 80.9% |
| 3650641 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.66 | 58.0 | 5.25e-01 | 100.0% | 70.4% |
| 3798423 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 59.0 | 5.42e-01 | 100.0% | 76.2% |
| 4296288 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.66 | 59.0 | 5.78e-01 | 100.0% | 94.3% |
| 5011190 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.66 | 55.0 | 5.20e-01 | 100.0% | 75.0% |
| 5037168 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.66 | 59.0 | 5.43e-01 | 100.0% | 81.6% |
| 5055355 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 52.0 | 5.40e-01 | 100.0% | 94.4% |
| 3707760 | 2.1.1.225 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 | 0.64 | 57.0 | 5.41e-01 | 100.0% | 88.3% |
| 3255112 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.64 | 56.0 | 5.30e-01 | 100.0% | 81.7% |
| 3392389 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 57.0 | 5.39e-01 | 100.0% | 82.5% |
| 3830448 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.64 | 57.0 | 5.03e-01 | 100.0% | 71.7% |
| 3943546 | 2.1.1.136 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3577 | 0.63 | 56.0 | 5.39e-01 | 100.0% | 95.5% |
| 4030011 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.63 | 37.0 | 3.91e-01 | 100.0% | 64.4% |
| 4024258 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 56.0 | 5.24e-01 | 100.0% | 83.3% |
| 3263786 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 55.0 | 4.94e-01 | 100.0% | 70.4% |
| 3616990 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 52.0 | 4.99e-01 | 98.0% | 80.0% |
| 3612689 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 54.0 | 5.23e-01 | 100.0% | 98.2% |
| 4976869 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 54.0 | 5.18e-01 | 100.0% | 88.7% |
| 4504110 | 2484.1.1.197 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 | 0.60 | 54.0 | 3.57e-01 | 100.0% | 38.8% |
| 317158 | 2.1.1.16 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind | 0.60 | 50.0 | 4.82e-01 | 99.0% | 79.3% |
| 3336960 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 50.0 | 4.90e-01 | 100.0% | 86.7% |
| 3931674 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 52.0 | 4.93e-01 | 100.0% | 83.5% |
| 3931232 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 46.0 | 4.29e-01 | 100.0% | 67.2% |
| 4997715 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 51.0 | 4.28e-01 | 100.0% | 95.3% |
| 3792885 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 51.0 | 4.58e-01 | 100.0% | 79.3% |
| 167481 | 2.1.1.16 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind | 0.55 | 46.0 | 4.36e-01 | 100.0% | 76.3% |
| 3271559 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 44.0 | 3.94e-01 | 93.9% | 98.5% |