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IMGVR_UViG_3300011013_002706-3300011013-Ga0114934_1000445212
Arc-VirIMGVR_UViG_3300011013_002706-3300011013-Ga0114934_1000445212
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-79
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nwuB01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.65 | 57.0 | 4.62e-01 | 100.0% | 82.5% |
| 3c9gA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.61 | 54.0 | 4.39e-01 | 100.0% | 85.7% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.59 | 42.0 | 3.26e-01 | 75.4% | 82.9% |
| 1zhvA00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.58 | 44.0 | 3.54e-01 | 83.1% | 79.1% |
| 5mw5A01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 48.0 | 3.81e-01 | 100.0% | 92.7% |
| 2j3rB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.55 | 42.0 | 3.36e-01 | 89.2% | 89.8% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.53 | 40.0 | 3.31e-01 | 83.1% | 89.6% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 41.0 | 3.15e-01 | 87.7% | 95.8% |
| 4anoA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 41.0 | 2.87e-01 | 84.6% | 57.4% |
| 2gjhA00 | 3.30.1070.20 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › | 0.52 | 37.0 | 3.99e-01 | 100.0% | 86.0% |
| 5joeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 3.20e-01 | 72.3% | 88.0% |
| 4hj1A01 | 2.60.98.50 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › | 0.51 | 43.0 | 3.19e-01 | 92.3% | 59.6% |
| 3c1mA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.51 | 46.0 | 3.41e-01 | 100.0% | 50.6% |
| 3kg5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.25e-01 | 100.0% | 49.5% |
| 7y9aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.31e-01 | 100.0% | 56.3% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.51 | 35.0 | 3.01e-01 | 75.4% | 87.0% |
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 34.0 | 3.38e-01 | 70.8% | 92.9% |
| 5edxA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.56e-01 | 100.0% | 57.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.50 | 40.0 | 3.58e-01 | 87.7% | 100.0% |
| 1x44A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 2.96e-01 | 70.8% | 78.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4313853 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.73 | 67.0 | 5.93e-01 | 100.0% | 97.8% |
| 4989883 | 3268.1.1.0 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase | 0.65 | 52.0 | 5.05e-01 | 100.0% | 77.3% |
| 4088603 | 284.1.1.23 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › DUF3713 | 0.63 | 55.0 | 4.74e-01 | 100.0% | 65.7% |
| 3311079 | 284.1.1.8 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_3 | 0.63 | 54.0 | 4.62e-01 | 100.0% | 78.2% |
| 3581537 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.62 | 54.0 | 4.58e-01 | 100.0% | 60.0% |
| 4972963 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.61 | 51.0 | 4.30e-01 | 100.0% | 85.8% |
| 4580140 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 36.0 | 3.23e-01 | 100.0% | 45.9% |
| 3621693 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.60 | 52.0 | 4.45e-01 | 100.0% | 68.2% |
| 3211117 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.57 | 49.0 | 4.18e-01 | 100.0% | 87.8% |
| 4069329 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.57 | 38.0 | 3.56e-01 | 100.0% | 56.2% |
| 4124687 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.57 | 38.0 | 3.65e-01 | 100.0% | 60.0% |
| 4984971 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.57 | 35.0 | 3.44e-01 | 100.0% | 58.6% |
| 4017316 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.57 | 39.0 | 2.94e-01 | 72.3% | 84.6% |
| 3987621 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.56 | 38.0 | 3.45e-01 | 100.0% | 54.1% |
| 3913695 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.55 | 36.0 | 3.10e-01 | 100.0% | 44.0% |
| 4065299 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.55 | 37.0 | 3.51e-01 | 100.0% | 60.0% |
| 4937694 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.54 | 35.0 | 3.14e-01 | 100.0% | 44.9% |
| 4142128 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 36.0 | 3.08e-01 | 100.0% | 45.0% |
| 3315331 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.54 | 37.0 | 3.40e-01 | 100.0% | 57.5% |
| 3431233 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.52 | 43.0 | 4.14e-01 | 100.0% | 80.0% |
| 3483320 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 47.0 | 3.79e-01 | 100.0% | 54.2% |
| 4946280 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.52 | 39.0 | 2.71e-01 | 100.0% | 24.1% |
| 3916054 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 35.0 | 2.13e-01 | 100.0% | 13.0% |
| 3500319 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.51 | 45.0 | 3.50e-01 | 100.0% | 44.8% |
| 5026207 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.51 | 35.0 | 2.71e-01 | 75.4% | 83.3% |
| 5016775 | 304.122.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nitrogen repressor-like proteins › Nitrogen repressor-like proteins › NRD1_2 | 0.51 | 35.0 | 2.96e-01 | 100.0% | 44.8% |
| 4972531 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.50 | 38.0 | 3.49e-01 | 100.0% | 63.7% |