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IMGVR_UViG_3300011013_002706-3300011013-Ga0114934_1000445215

Arc-Vir

IMGVR_UViG_3300011013_002706-3300011013-Ga0114934_1000445215

Quality

93.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-90
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 49.0 5.14e-01 100.0% 78.8%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 47.0 5.43e-01 100.0% 100.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 45.0 4.90e-01 91.0% 80.0%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.39e-01 95.5% 93.1%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 46.0 5.23e-01 100.0% 97.0%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.67 36.0 4.57e-01 74.2% 95.8%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 5.13e-01 100.0% 100.0%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 44.0 5.02e-01 98.9% 100.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 5.17e-01 97.8% 98.6%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 39.0 4.38e-01 89.9% 80.9%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 35.0 4.22e-01 78.7% 89.3%
3exzB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 47.0 4.00e-01 84.3% 96.6%
7jiuA03 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.59 51.0 4.42e-01 94.4% 92.6%
2vgmA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.59 52.0 4.73e-01 100.0% 74.6%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.59 45.0 4.80e-01 94.4% 92.4%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.59 53.0 4.15e-01 100.0% 83.5%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 39.0 4.27e-01 91.0% 86.1%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.58 39.0 4.41e-01 92.1% 98.4%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 34.0 3.88e-01 78.7% 79.7%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 34.0 4.19e-01 78.7% 98.1%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.57 35.0 4.12e-01 87.6% 91.5%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.57 44.0 4.23e-01 84.3% 74.5%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.57 49.0 4.04e-01 95.5% 74.8%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 45.0 4.28e-01 93.3% 73.1%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.22e-01 86.5% 100.0%
4ffuB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 44.0 3.70e-01 85.4% 94.7%
1pnjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 42.0 4.35e-01 91.0% 86.0%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.54 47.0 3.81e-01 95.5% 72.4%
1v29B02 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.54 47.0 4.62e-01 95.5% 90.7%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.54 35.0 4.05e-01 88.8% 92.2%
3rbyA01 2.40.128.320 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain 0.54 46.0 3.96e-01 96.6% 86.7%
1g6q102 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.54 42.0 3.40e-01 86.5% 98.4%
7vpjA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 46.0 3.61e-01 94.4% 88.8%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.53 45.0 3.36e-01 98.9% 35.9%
1jb3A00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 40.0 3.62e-01 82.0% 83.5%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.53 45.0 4.26e-01 94.4% 88.9%
3ptaA04 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.53 46.0 3.67e-01 97.8% 61.3%
6psyA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 45.0 3.35e-01 93.3% 78.9%
1ut7B01 2.170.150.80 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › NAC domain 0.53 38.0 3.43e-01 75.3% 72.0%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.53 43.0 3.69e-01 94.4% 54.8%
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.53 44.0 3.82e-01 98.9% 57.9%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.52 45.0 4.47e-01 100.0% 94.7%
1m1fB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.51 43.0 4.14e-01 93.3% 81.0%
2gtlM02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.51 44.0 3.66e-01 97.8% 74.7%
5choF00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.42e-01 88.8% 86.3%
5c98B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 41.0 3.59e-01 85.4% 72.9%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.50 43.0 3.69e-01 98.9% 57.6%
4xzjA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.50 46.0 3.46e-01 100.0% 72.0%
1wthD01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 40.0 3.80e-01 87.6% 93.4%
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.50 43.0 3.98e-01 95.5% 79.3%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.50 39.0 3.48e-01 84.3% 82.8%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4091379 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 50.0 5.49e-01 97.8% 91.4%
3843359 4.1.1.246 beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.70 53.0 5.46e-01 100.0% 84.7%
3550699 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.67 49.0 4.80e-01 95.5% 71.6%
5029166 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 51.0 5.57e-01 97.8% 98.6%
3540253 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.64 50.0 4.89e-01 100.0% 77.9%
4643742 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 54.0 5.51e-01 100.0% 97.6%
4055974 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.63 56.0 5.00e-01 100.0% 69.6%
3059317 4.1.1.116 beta barrels › SH3 › SH3 › SH3 › SH3_14 0.61 51.0 4.75e-01 93.3% 99.1%
3995092 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.60 44.0 3.45e-01 100.0% 34.5%
5019257 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 40.0 2.87e-01 91.0% 21.4%
3675120 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 45.0 4.62e-01 95.5% 85.9%
3174822 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.58 48.0 5.01e-01 98.9% 97.5%
609 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.58 51.0 4.67e-01 100.0% 73.8%
3599975 4.1.1.103 beta barrels › SH3 › SH3 › SH3 › SH3_12 0.58 49.0 3.73e-01 94.4% 55.9%
3484620 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 47.0 4.68e-01 94.4% 84.2%
4001871 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.58 49.0 3.64e-01 93.3% 74.7%
3687023 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.78e-01 94.4% 89.0%
861 9.3.1.3 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.57 49.0 4.31e-01 93.3% 87.5%
3713629 4.1.1.315 beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.57 52.0 3.29e-01 100.0% 42.6%
5000523 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.57 50.0 4.57e-01 100.0% 79.2%
860 9.3.1.3 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.57 49.0 4.41e-01 94.4% 98.4%
4646762 3480.1.1.1 a+b duplicates or obligate multimers › Lipoprotein-associated type-17-domain › Lipoprotein-associated type-17-domain › Lipoprotein-associated type-17-domain › Lipoprotein_17 0.57 42.0 4.32e-01 85.4% 82.4%
3999482 4.1.1.311 beta barrels › SH3 › SH3 › SH3 › BRWD_AD 0.57 51.0 4.77e-01 100.0% 89.1%
859 9.3.1.3 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.57 48.0 4.30e-01 93.3% 89.5%
None 0.56 44.0 2.76e-01 84.3% 19.0%
3706107 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.56 47.0 3.47e-01 91.0% 78.3%
3739773 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 47.0 4.69e-01 96.6% 95.8%
3798523 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 44.0 4.65e-01 91.0% 96.2%
4097328 9.3.1.3 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.56 47.0 4.21e-01 92.1% 96.8%
3276317 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 47.0 3.06e-01 96.6% 26.3%
4259027 9.3.1.3 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.55 47.0 4.25e-01 95.5% 98.4%
4025174 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.55 46.0 3.59e-01 92.1% 80.3%
3728321 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.55 46.0 3.30e-01 92.1% 71.9%
3261801 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.54 46.0 3.29e-01 91.0% 77.3%
3610728 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.54 46.0 3.17e-01 92.1% 71.4%
3730606 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.54 46.0 3.39e-01 93.3% 75.3%
3700454 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 46.0 4.31e-01 97.8% 98.3%
3768231 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.54 45.0 3.14e-01 91.0% 65.1%
3567723 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.54 46.0 3.25e-01 92.1% 72.3%
3773104 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 48.0 4.18e-01 98.9% 79.3%
3597786 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.49e-01 93.3% 95.8%
3428734 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.54 45.0 2.91e-01 92.1% 44.6%
3269447 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.53 45.0 3.12e-01 91.0% 71.6%
4022153 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.53 48.0 4.04e-01 100.0% 60.7%
3846584 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.63e-01 93.3% 57.1%
3479639 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.53 46.0 3.46e-01 94.4% 87.1%
3202278 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.53 43.0 3.49e-01 88.8% 58.2%
3189419 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.53 45.0 3.14e-01 92.1% 69.3%
3994731 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.53 42.0 3.32e-01 85.4% 51.1%
3642858 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.53 44.0 3.12e-01 92.1% 70.0%
4030767 3504.1.1.1 beta barrels › MutM N-terminal domain-like › Hypothetical protein YojF › Hypothetical protein YojF › DUF1806 0.53 44.0 4.04e-01 95.5% 89.2%
4383382 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.53 45.0 3.52e-01 93.3% 80.5%
3726250 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 43.0 3.49e-01 93.3% 78.0%
3580198 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.52 44.0 3.54e-01 92.1% 97.1%
4073608 1.1.5.57 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.52 46.0 3.71e-01 100.0% 82.2%
3612182 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 43.0 4.36e-01 92.1% 100.0%
3503000 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 43.0 4.37e-01 95.5% 97.6%
3795297 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 4.01e-01 93.3% 75.4%
3411797 375.1.1.9 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.51 41.0 3.96e-01 91.0% 96.2%
3452728 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.50 42.0 3.28e-01 93.3% 49.8%
3486569 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.50 42.0 3.07e-01 93.3% 79.1%