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IMGVR_UViG_3300011013_002706-3300011013-Ga0114934_100044522
Arc-VirIMGVR_UViG_3300011013_002706-3300011013-Ga0114934_100044522
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-70
Domain cluster:
rep: MN698239.1__QGZ17650.1__HTVC023P_gp21__00021__D7-84
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wbeA01 | 1.10.3520.10 | Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein | 0.61 | 36.0 | 2.60e-01 | 90.3% | 19.5% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.61 | 42.0 | 3.70e-01 | 100.0% | 48.4% |
| 1v64A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.58 | 44.0 | 3.69e-01 | 82.3% | 51.9% |
| 3a52A02 | 1.10.60.40 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › | 0.57 | 38.0 | 3.54e-01 | 87.1% | 51.8% |
| 2vxgA02 | 1.10.220.100 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 | 0.51 | 44.0 | 4.00e-01 | 98.4% | 70.6% |
| 4bkxA01 | 4.10.1240.50 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.51 | 35.0 | 2.99e-01 | 83.9% | 39.8% |
| 2ah5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 38.0 | 3.83e-01 | 83.9% | 86.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3720948 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 58.0 | 5.46e-01 | 100.0% | 83.5% |
| 3954888 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.56 | 45.0 | 4.52e-01 | 91.9% | 87.7% |
| 5054324 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.56 | 44.0 | 3.70e-01 | 91.9% | 85.8% |
| 5054121 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.56 | 45.0 | 3.83e-01 | 93.5% | 74.5% |
| 4544247 | 132.3.1.1 ↗ | alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD | 0.56 | 38.0 | 3.88e-01 | 72.6% | 78.3% |
| 3586489 | 2004.1.1.33 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind | 0.51 | 45.0 | 2.76e-01 | 98.4% | 31.6% |
D2
medium
residues 74-108
Domain cluster:
rep: MN698241.1__QGZ17810.1__HTVC027P_gp29__00029__D76-110