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IMGVR_UViG_3300011013_002706-3300011013-Ga0114934_100044523
Arc-VirIMGVR_UViG_3300011013_002706-3300011013-Ga0114934_100044523
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-60
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 44.0 | 4.30e-01 | 96.5% | 65.1% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 40.0 | 3.92e-01 | 96.5% | 65.1% |
| 1eyqA02 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.58 | 42.0 | 3.07e-01 | 100.0% | 27.7% |
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 38.0 | 2.71e-01 | 100.0% | 22.2% |
| 3qzqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 38.0 | 3.59e-01 | 100.0% | 58.0% |
| 3fn5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.54 | 48.0 | 3.45e-01 | 100.0% | 49.1% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.52 | 39.0 | 2.94e-01 | 100.0% | 31.1% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 33.0 | 2.83e-01 | 100.0% | 37.0% |
| 2jr1A01 | 3.30.160.510 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Histone-like nucleoid-structuring protein H-NS | 0.51 | 31.0 | 3.05e-01 | 86.0% | 50.0% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 35.0 | 2.28e-01 | 96.5% | 15.4% |
| 1t6eX01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 41.0 | 3.02e-01 | 94.7% | 39.1% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 40.0 | 3.72e-01 | 100.0% | 69.4% |
| 6ruiB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.50 | 42.0 | 3.37e-01 | 100.0% | 65.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948467 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.65 | 44.0 | 4.25e-01 | 100.0% | 61.5% |
| 4974179 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 43.0 | 3.67e-01 | 100.0% | 43.6% |
| 3184389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 46.0 | 3.28e-01 | 98.2% | 33.1% |
| 4202541 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.53 | 46.0 | 3.71e-01 | 100.0% | 52.2% |
| 4940409 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.52 | 38.0 | 3.48e-01 | 100.0% | 56.2% |
| 3587374 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.52 | 40.0 | 3.00e-01 | 89.5% | 41.8% |
| 2801086 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.52 | 38.0 | 2.41e-01 | 100.0% | 13.1% |
| 1173463 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.52 | 38.0 | 3.48e-01 | 100.0% | 58.0% |
| 3506274 | 331.2.1.7 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM1_C_vert_fung | 0.51 | 39.0 | 3.11e-01 | 100.0% | 39.2% |
| 1144777 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.51 | 44.0 | 3.68e-01 | 100.0% | 72.1% |
| 3588105 | 11.4.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) | 0.51 | 36.0 | 2.92e-01 | 82.5% | 35.8% |
| 3777679 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.51 | 42.0 | 2.80e-01 | 98.2% | 47.6% |
| 4050042 | 4.1.1.441 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26332 | 0.51 | 36.0 | 3.27e-01 | 100.0% | 55.0% |
| 3715696 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.50 | 35.0 | 2.29e-01 | 100.0% | 14.9% |