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IMGVR_UViG_3300011171_000038-3300011171-Ga0136580_1020418
Arc-VirIMGVR_UViG_3300011171_000038-3300011171-Ga0136580_1020418
Identity
- Kingdom:
- archaea
Quality
84.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-110
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xkoC01 | 2.30.30.660 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3539) | 0.61 | 30.0 | 4.05e-01 | 72.7% | 93.8% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 33.0 | 4.01e-01 | 75.8% | 85.7% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.59 | 36.0 | 3.98e-01 | 73.7% | 77.9% |
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.58 | 37.0 | 4.17e-01 | 82.8% | 83.1% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.57 | 37.0 | 3.60e-01 | 87.9% | 59.3% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 41.0 | 3.15e-01 | 78.8% | 72.1% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 27.0 | 3.31e-01 | 72.7% | 72.1% |
| 5d1pA01 | 3.10.450.740 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 35.0 | 3.95e-01 | 78.8% | 92.5% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.52 | 33.0 | 3.37e-01 | 82.8% | 66.0% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 4.00e-01 | 91.9% | 86.0% |
| 4z9mB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.52 | 41.0 | 3.38e-01 | 88.9% | 63.1% |
| 3s27B01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 3.94e-01 | 93.9% | 86.5% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 28.0 | 3.31e-01 | 92.9% | 80.3% |
| 3o4hA01 | 2.130.10.150 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain | 0.51 | 40.0 | 2.92e-01 | 86.9% | 97.3% |
| 4l1nA00 | 2.40.128.660 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 | 0.51 | 43.0 | 3.66e-01 | 92.9% | 99.4% |
| 4e9jA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 27.0 | 3.12e-01 | 81.8% | 72.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3988706 | 243.3.1.13 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 | 0.63 | 35.0 | 4.08e-01 | 79.8% | 77.1% |
| 3589569 | 243.3.1.13 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 | 0.62 | 34.0 | 4.23e-01 | 76.8% | 88.3% |
| 3935730 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.60 | 35.0 | 3.68e-01 | 73.7% | 62.2% |
| 5051706 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.59 | 34.0 | 3.47e-01 | 81.8% | 57.0% |
| 4993192 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 34.0 | 4.09e-01 | 78.8% | 89.2% |
| 3763927 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.58 | 38.0 | 3.66e-01 | 81.8% | 59.6% |
| 3624850 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.58 | 37.0 | 3.65e-01 | 81.8% | 61.0% |
| 3189419 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.57 | 50.0 | 3.62e-01 | 97.0% | 87.9% |
| 3781145 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.56 | 40.0 | 3.49e-01 | 75.8% | 84.8% |
| 3332764 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.56 | 34.0 | 3.67e-01 | 82.8% | 70.6% |
| 3511696 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.55 | 35.0 | 4.07e-01 | 81.8% | 91.4% |
| 4528716 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.55 | 36.0 | 3.57e-01 | 98.0% | 61.9% |
| 3219274 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 38.0 | 3.96e-01 | 81.8% | 78.7% |
| 5072132 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 32.0 | 3.44e-01 | 77.8% | 70.0% |
| 4978329 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 32.0 | 3.45e-01 | 76.8% | 68.7% |
| 4998670 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.54 | 31.0 | 3.30e-01 | 76.8% | 63.3% |
| 2773872 | 5.1.5.79 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, WDR90_beta-prop_4th | 0.54 | 42.0 | 2.97e-01 | 85.9% | 85.8% |
| 5011833 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 42.0 | 4.12e-01 | 96.0% | 78.1% |
| 4971247 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 32.0 | 3.49e-01 | 79.8% | 72.5% |
| 4213802 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.53 | 46.0 | 4.15e-01 | 98.0% | 88.6% |
| 4678702 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.52 | 43.0 | 4.03e-01 | 89.9% | 86.4% |
| 5001326 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.52 | 34.0 | 2.64e-01 | 97.0% | 26.5% |
| 1563689 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.52 | 43.0 | 3.99e-01 | 91.9% | 85.4% |
| 3778085 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 2.88e-01 | 91.9% | 32.4% |
| 3452428 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 42.0 | 2.90e-01 | 89.9% | 66.6% |
| 3211832 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 38.0 | 2.76e-01 | 80.8% | 32.1% |
| None | — | 0.51 | 44.0 | 2.61e-01 | 100.0% | 43.5% | |
| 4976136 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.51 | 37.0 | 3.81e-01 | 81.8% | 80.0% |
| 3461711 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.50 | 42.0 | 2.98e-01 | 96.0% | 70.7% |
| 3787121 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.50 | 36.0 | 3.38e-01 | 74.7% | 88.0% |
| 3229434 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.50 | 40.0 | 2.91e-01 | 88.9% | 77.4% |